RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SAR1BQ9Y6B6 198 aa4.57□□□□□ -1.68
ATXN3-245ENST00000556958 CAPN7Q9Y6W3 813 aa4.57□□□□□ -1.68
ATXN3-245ENST00000556958 ALMS1Q8TCU4 4167 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 HECTD4Q9Y4D8 3996 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 hCG_2014768A0A024R1R8 64 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 PRR23D1E9PI22 279 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 H0YAE9 185 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 CCL24O00175 119 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 NDUFB3O43676 98 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 CHEK2O96017 543 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 SERPINE1P05121 402 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 PRR23D2P0DMB1 279 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 ADORA3P0DMS8 318 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 NR2F1P10589 423 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 COX5BP10606 129 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 CPEP16870 476 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 TCP1P17987 556 aaKnown RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 PRPS1L1P21108 318 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 RPS4Y1P22090 263 aaKnown RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 AZGP1P25311 298 aaKnown RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 MECP2P51608 486 aaKnown RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 PRKAA2P54646 552 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 RPL38P63173 70 aaKnown RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 MRPS25P82663 173 aaKnown RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 DR1Q01658 176 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 C2orf54Q08AI8 447 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 CALCOCO2Q13137 446 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 UAP1Q16222 522 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 TMEM95Q3KNT9 176 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 ZNF260Q3ZCT1 412 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 LRRC10Q5BKY1 277 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 CLEC12AQ5QGZ9 265 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 FAM27BQ5VT28 67 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 LIPMQ5VYY2 423 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 OR2T2Q6IF00 324 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 CD300LDQ6UXZ3 194 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 OR2W3Q7Z3T1 314 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 TMEM219Q86XT9 240 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 DNAJA4Q8WW22 397 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 RASD2Q96D21 266 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 RNFT2Q96EX2 444 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 ITCHQ96J02 903 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 ECSITQ9BQ95 431 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 DUSP26Q9BV47 211 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 WNT5BQ9H1J7 359 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 SLC38A1Q9H2H9 487 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 MEAF6Q9HAF1 191 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 UFSP2Q9NUQ7 469 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 SELENONQ9NZV5 590 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 PRPF19Q9UMS4 504 aaKnown RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 PLA2G2DQ9UNK4 145 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 AURKCQ9UQB9 309 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 LYVE1Q9Y5Y7 322 aa4.56□□□□□ -1.68
ATXN3-245ENST00000556958 SIRT4Q9Y6E7 314 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-245ENST00000556958 IGLV1-36A0A0B4J1U3 117 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 A0A1W2PQ09 198 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 GMNCA6NCL1 334 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 CENPBD1B2RD01 187 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 C11orf98E9PRG8 122 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 MT-ATP6P00846 226 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 HCKP08631 526 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 SBK3P0C264 359 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 PGA4P0DJD7 388 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 PGA3P0DJD8 388 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 NR2C1P13056 603 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 PRG2P13727 222 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 MUC1P15941 1255 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-245ENST00000556958 CNTFRP26992 372 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 POU1F1P28069 291 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 CHI3L1P36222 383 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-245ENST00000556958 CD200P41217 278 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 CEBPDP49716 269 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-245ENST00000556958 RAB13P51153 203 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 DLX1P56177 255 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 ERVK-25P63136 954 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 FUT5Q11128 374 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 MAB21L1Q13394 359 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 SYPL1Q16563 259 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 HIST3H3Q16695 136 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 MICBQ29980 383 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 CEP85LQ5SZL2 805 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 PLBD1Q6P4A8 553 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 FBXW12Q6X9E4 464 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 LINC00336Q6ZUF6 198 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 HDDC2Q7Z4H3 204 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 ZNF695Q8IW36 515 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 OSR2Q8N2R0 312 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 CCNYL1Q8N7R7 359 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 PCYOX1LQ8NBM8 494 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 OR5J2Q8NH18 312 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 OR52P1PQ8NH57 321 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 H1FXQ92522 213 aaKnown RBP4.55□□□□□ -1.68
ATXN3-245ENST00000556958 SLC35B4Q969S0 331 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 FOXRED1Q96CU9 486 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-245ENST00000556958 MALSU1Q96EH3 234 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 L3HYPDHQ96EM0 354 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 C16orf45Q96MC5 204 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-245ENST00000556958 ZNF347Q96SE7 839 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 ATF6BQ99941 703 aa4.55□□□□□ -1.68
ATXN3-245ENST00000556958 WACQ9BTA9 647 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms