RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 DPY19L2P2Q6ZN68 376 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 CFAP77Q6ZQR2 320 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 KIR3DL3Q8N743 410 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 CELF2-AS1Q8N7Q2 184 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 OR4F5Q8NH21 305 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 VIPAS39Q9H9C1 493 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 TMCC3Q9ULS5 477 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 SFTPBP07988 381 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 ACSM4P0C7M7 580 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 PSMB10P40306 273 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 GSK3BP49841 420 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 BPIFB3P59826 476 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 HOXA4Q00056 320 aaPredicted RBP15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 RELBQ01201 579 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 DBPQ10586 325 aaPredicted RBP15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 SEC23BQ15437 767 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 ZNF362Q5T0B9 420 aaPredicted RBP15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 PRAMEF6Q5VXH4 476 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 SLC18B1Q6NT16 456 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 Q6YL49 198 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 C17orf107Q6ZR85 190 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 SLC26A10Q8NG04 563 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 OR11L1Q8NGX0 322 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 ERGIC1Q969X5 290 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 PCGF1Q9BSM1 259 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 CHIAQ9BZP6 476 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 BEX1Q9HBH7 125 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 NOX4Q9NPH5 578 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 C1RLQ9NZP8 487 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 PDP1Q9P0J1 537 aaPredicted RBP15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 B9D1Q9UPM9 204 aa15.21■□□□□ 0.03
VIPAS39-209ENST00000556909 TRBV4-1A0A0J9YWV2 114 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 UNC119BA6NIH7 251 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 SLC22A2O15244 555 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 NDUFA7O95182 113 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 PPP1R3DO95685 299 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 NCK1P16333 377 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 CFHR2P36980 270 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 MPPED2Q15777 294 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 OLFML2AQ68BL7 652 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 C8orf82Q6P1X6 216 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 LINC00346Q8IVM7 164 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 OR6V1Q8N148 313 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 RP9Q8TA86 221 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 FAM162AQ96A26 154 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 TECTBQ96PL2 329 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 UFSP2Q9NUQ7 469 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 NDUFAF4Q9P032 175 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 CTSZQ9UBR2 303 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 AURKCQ9UQB9 309 aa15.2■□□□□ 0.02
VIPAS39-209ENST00000556909 F5H5K5 113 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 CRYBA1P05813 215 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 MELTFP08582 738 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 MDH1P40925 334 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 NPY4RP50391 375 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 TRAP1Q12931 704 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 SMARCD3Q6STE5 483 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 NAA40Q86UY6 237 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 TMEM86BQ8N661 226 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 FANK1Q8TC84 345 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 ERMAPQ96PL5 475 aaPredicted RBP15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 TBX15Q96SF7 602 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 PITX2Q99697 317 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 ATF6BQ99941 703 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 CITED1Q99966 193 aa15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 MMADHCQ9H3L0 296 aaPredicted RBP15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 SRA1Q9HD15 236 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 PNRC2Q9NPJ4 139 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-209ENST00000556909 ZNF879B4DU55 563 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 P2RY10O00398 339 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 TNFRSF13BO14836 293 aaPredicted RBP15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 LCATP04180 440 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 MMP9P14780 707 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 RHCEP18577 417 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 ECH1Q13011 328 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 MALLQ13021 153 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 BRICD5Q6PL45 260 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 PGAP1Q75T13 922 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 SLCO4A1Q96BD0 722 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 FAM71F1Q96KD3 344 aaPredicted RBP15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 DHRS1Q96LJ7 313 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 NMNAT3Q96T66 252 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 HOPXQ9BPY8 73 aaPredicted RBP15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 FUZQ9BT04 418 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 KRCC1Q9NPI7 259 aaPredicted RBP15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 CYB5R1Q9UHQ9 305 aa15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 FAM32AQ9Y421 112 aaKnown RBP15.18■□□□□ 0.02
VIPAS39-209ENST00000556909 CENPVL3A0A0U1RRI6 287 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 CLPSL1A2RUU4 121 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 TOX4O94842 621 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 DIRAS1O95057 198 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 COX4I1P13073 169 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 GGT2P36268 569 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 OR8G1Q15617 311 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 CD276Q5ZPR3 534 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 SFRP4Q6FHJ7 346 aaPredicted RBP15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 OR52J3Q8NH60 311 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 SPRYD4Q8WW59 207 aaPredicted RBP15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 C7orf34Q96L11 122 aa15.17■□□□□ 0.02
VIPAS39-209ENST00000556909 KCTD14Q9BQ13 255 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms