RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	PPP1R3E	Q9H7J1	279 aa		7.52	□□□□□ -1.21
PRKCH-222	ENST00000556778	AMBN	Q9NP70	447 aa		7.52	□□□□□ -1.21
PRKCH-222	ENST00000556778	DYNLRB1	Q9NP97	96 aa		7.52	□□□□□ -1.21
PRKCH-222	ENST00000556778	TBCCD1	Q9NVR7	557 aa		7.52	□□□□□ -1.21
PRKCH-222	ENST00000556778	TREM2	Q9NZC2	230 aa		7.52	□□□□□ -1.21
PRKCH-222	ENST00000556778	H2AFY2	Q9P0M6	372 aa	Predicted RBP	7.52	□□□□□ -1.21
PRKCH-222	ENST00000556778	ORC6	Q9Y5N6	252 aa		7.52	□□□□□ -1.21
PRKCH-222	ENST00000556778	GMPPB	Q9Y5P6	360 aa		7.52	□□□□□ -1.21
PRKCH-222	ENST00000556778	CACNG2	Q9Y698	323 aa		7.52	□□□□□ -1.21
PRKCH-222	ENST00000556778	PMF1-BGLAP	U3KQ54	211 aa		7.52	□□□□□ -1.21
PRKCH-222	ENST00000556778	IGHV4-30-2	A0A087WSY4	118 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	IGHV3-64D	A0A0J9YX35	117 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	ZSCAN5B	A6NJL1	495 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778		H0YL77	283 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778		M0R135	149 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	CASQ2	O14958	399 aa	Predicted RBP	7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	SMAD7	O15105	426 aa	Known RBP	7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	TMCC2	O75069	709 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	NCR1	O76036	304 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	IGHV3-13	P01766	116 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	LYN	P07948	512 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	GCH1	P30793	250 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	HTR1F	P30939	366 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	OTX1	P32242	354 aa	Predicted RBP	7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	SLC6A9	P48067	706 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	EVX1	P49640	407 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	EFNA4	P52798	201 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	BLVRA	P53004	296 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	NUDT6	P53370	316 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	TPTE	P56180	551 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	KLF3	P57682	345 aa	Predicted RBP	7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	CDC42	P60953	191 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	CCL8	P80075	99 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	ZNF92	Q03936	586 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	SLC34A1	Q06495	639 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	ECH1	Q13011	328 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	TNK1	Q13470	666 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	GK2	Q14410	553 aa	Predicted RBP	7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	TAF13	Q15543	124 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	SMN1	Q16637	294 aa	Known RBP	7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	NKPD1	Q17RQ9	610 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	ZNF718	Q3SXZ3	478 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	GLYATL3	Q5SZD4	288 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	OGFRL1	Q5TC84	451 aa	Predicted RBP	7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	MBNL2	Q5VZF2	373 aa	Known RBP	7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	SPNS3	Q6ZMD2	512 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778		Q6ZR03	302 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	DNM1P46	Q6ZS02	220 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	PRSS45	Q7RTY3	260 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	SLC35F2	Q8IXU6	374 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	BHLHE23	Q8NDY6	225 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	OR8J1	Q8NGP2	316 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	RNF133	Q8WVZ7	376 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	SGK3	Q96BR1	496 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	HAVCR1	Q96D42	359 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	TRMT61A	Q96FX7	289 aa	Known RBP	7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	ZNF799	Q96GE5	643 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	APOL4	Q9BPW4	351 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	ELOVL3	Q9HB03	270 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	SMPD3	Q9NY59	655 aa	Predicted RBP	7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	ENOPH1	Q9UHY7	261 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	LAMP5	Q9UJQ1	280 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	ABCA4	P78363	2273 aa		7.51	□□□□□ -1.21
PRKCH-222	ENST00000556778	MAP1A	P78559	2803 aa	Predicted RBP	7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778		A0A1W2PQL4	384 aa	Predicted RBP	7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	C17orf100	A8MU93	164 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	ZNF878	C9JN71	531 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778		H7C1Q1	480 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778		M0R233	179 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	SLC16A6	O15403	523 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	CDC14B	O60729	498 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	PNP	P00491	289 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	IGHV1-46	P01743	117 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	HLA-DPB1	P04440	258 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	RPLP1	P05386	114 aa	Known RBP	7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	GNAO1	P09471	354 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	H2BFM	P0C1H6	154 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	SBK2	P0C263	348 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	SELE	P16581	610 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	CX3CR1	P49238	355 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	PPOX	P50336	477 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	ZNF121	P58317	390 aa	Predicted RBP	7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	CXCR4	P61073	352 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	RPS23	P62266	143 aa	Known RBP	7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	SNRPG	P62308	76 aa	Known RBP	7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	GGTLC2	Q14390	218 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	CARTPT	Q16568	116 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	SHE	Q5VZ18	495 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	ARL9	Q6T311	187 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	USP51	Q70EK9	711 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	FAM57B	Q71RH2	274 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	ZNF771	Q7L3S4	317 aa	Predicted RBP	7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	LURAP1L	Q8IV03	231 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	ZNF283	Q8N7M2	679 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	RHOXF1	Q8NHV9	184 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	TRUB1	Q8WWH5	349 aa	Known RBP	7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	CYGB	Q8WWM9	190 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	YIPF5	Q969M3	257 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	SPTSSA	Q969W0	71 aa		7.5	□□□□□ -1.21
PRKCH-222	ENST00000556778	APOBEC3D	Q96AK3	386 aa	Predicted RBP	7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms