RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 CDC42EP2O14613 210 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 HS3ST1O14792 307 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 TRAF3IP2O43734 574 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-243ENST00000556671 SLC16A7O60669 478 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 KRT36O76013 467 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 ZNF432O94892 652 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 NDUFB2O95178 105 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 SLC2A10O95528 541 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 PPP1R3DO95685 299 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 RAB36O95755 333 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 RENP00797 406 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 HLA-DQA2P01906 255 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 FAM90A15PP0C7V4 464 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 FAM90A14PP0C7W9 464 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 OR8G3PP0DMU2 310 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 PRKACGP22612 351 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 PTAFRP25105 342 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 RPS6KA3P51812 740 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 ARHGDIAP52565 204 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 CDH11P55287 796 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 SH3BGRP55822 239 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-243ENST00000556671 RAP1BP61224 184 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 RAP1AP62834 184 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 GALK2Q01415 458 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 HSF2Q03933 536 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 RUNX1T1Q06455 604 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 FMODQ06828 376 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 SPOCK1Q08629 439 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 BNIP1Q12981 228 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 CARTPTQ16568 116 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 GSG1Q2KHT4 349 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 CLEC12AQ5QGZ9 265 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 C1orf146Q5VVC0 180 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 OTPQ5XKR4 325 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 OR2T5Q6IEZ7 315 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 TMPRSS11FQ6ZWK6 438 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 SLC16A14Q7RTX9 510 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 HDDC2Q7Z4H3 204 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 TSEN54Q7Z6J9 526 aaKnown RBP4.03□□□□□ -1.76
ATXN3-243ENST00000556671 MDP1Q86V88 176 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 WDFY1Q8IWB7 410 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 SKA3Q8IX90 412 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 TMEM123Q8N131 208 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 SLC22A24Q8N4F4 322 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 CLDN22Q8N7P3 220 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 ADPRHL1Q8NDY3 354 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 OR2T29Q8NH02 315 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 OR4K13Q8NH42 304 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 GIPC3Q8TF64 312 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 SMAP2Q8WU79 429 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-243ENST00000556671 CANT1Q8WVQ1 401 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 HDAC2Q92769 488 aaKnown RBP4.03□□□□□ -1.76
ATXN3-243ENST00000556671 TMEM54Q969K7 222 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 PIGTQ969N2 578 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 RASD2Q96D21 266 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 ASB9Q96DX5 294 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 LRR1Q96L50 414 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 Q96M85 177 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 ZNF570Q96NI8 536 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 SLC38A2Q96QD8 506 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 CHID1Q9BWS9 393 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 OR10A4Q9H209 315 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 LRMDAQ9H2I8 198 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 MUC13Q9H3R2 512 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 AAMDCQ9H7C9 122 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 PLEKHF2Q9H8W4 249 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 ZNF556Q9HAH1 456 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 MAN2C1Q9NTJ4 1040 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 LIN7CQ9NUP9 197 aaKnown RBP4.03□□□□□ -1.76
ATXN3-243ENST00000556671 NPAP1Q9NZP6 1156 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 PDP1Q9P0J1 537 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-243ENST00000556671 STX18Q9P2W9 335 aaKnown RBP4.03□□□□□ -1.76
ATXN3-243ENST00000556671 MALT1Q9UDY8 824 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 MGAT4BQ9UQ53 548 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 RCE1Q9Y256 329 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 ADAM18Q9Y3Q7 739 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 N6AMT1Q9Y5N5 214 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 MAGED1Q9Y5V3 778 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-243ENST00000556671 SLC25A15Q9Y619 301 aa4.03□□□□□ -1.76
ATXN3-243ENST00000556671 POLQO75417 2590 aa4.03□□□□□ -1.77
ATXN3-243ENST00000556671 MYO9AB2RTY4 2548 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 TACC2O95359 2948 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 IGHV1-18A0A0C4DH31 117 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 TEX13CA0A0J9YWL9 993 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 A0A1W2PPR1 153 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 A0A1W2PRQ8 180 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 DHRS12A0PJE2 317 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 E7EQL1 145 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 ATP6V1G2-DDX39BF2Z307 99 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 H3BN98 237 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 TNFRSF13BO14836 293 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-243ENST00000556671 ENTPD5O75356 428 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 PTP4A3O75365 173 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 TIPRLO75663 272 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 UBL3O95164 117 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 SOX14O95416 240 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 IFNA2P01563 188 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 LCKP06239 509 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 CD14P08571 375 aa4.02□□□□□ -1.77
ATXN3-243ENST00000556671 IGFBP1P08833 259 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms