RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 C1QTNF5Q9BXJ0 243 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 CDCA4Q9BXL8 241 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 CCDC90BQ9GZT6 254 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 POFUT1Q9H488 388 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 NIPAL2Q9H841 368 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 BRD7Q9NPI1 651 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 FAM206AQ9NX38 181 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 CHCHD3Q9NX63 227 aaKnown RBP15.01□□□□□ -0.01
TUBB3-211ENST00000556536 EIF3KQ9UBQ5 218 aaKnown RBP15.01□□□□□ -0.01
TUBB3-211ENST00000556536 STARD10Q9Y365 291 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 N6AMT1Q9Y5N5 214 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 ATP23Q9Y6H3 246 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 POLQO75417 2590 aa15.01□□□□□ -0.01
TUBB3-211ENST00000556536 GPRIN2O60269 458 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 LCATP04180 440 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 DCTDP32321 178 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 PSMA6P60900 246 aaKnown RBP15□□□□□ -0.01
TUBB3-211ENST00000556536 ERVS71-1P61550 626 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 SNTB2Q13425 540 aaKnown RBP15□□□□□ -0.01
TUBB3-211ENST00000556536 DOC2BQ14184 412 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 SNAI3Q3KNW1 292 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 RNLSQ5VYX0 342 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 PRSS48Q7RTY5 328 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 KCTD20Q7Z5Y7 419 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 SYS1Q8N2H4 156 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 KLHL36Q8N4N3 616 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 ZNF485Q8NCK3 441 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 SPRYD4Q8WW59 207 aaPredicted RBP15□□□□□ -0.01
TUBB3-211ENST00000556536 RORBQ92753 470 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 PPP1R14AQ96A00 147 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 PELI1Q96FA3 418 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 MRPL48Q96GC5 212 aaKnown RBP15□□□□□ -0.01
TUBB3-211ENST00000556536 TBCCD1Q9NVR7 557 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 ZNF319Q9P2F9 582 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 CAB39Q9Y376 341 aaPredicted RBP15□□□□□ -0.01
TUBB3-211ENST00000556536 R4GMQ9 66 aa15□□□□□ -0.01
TUBB3-211ENST00000556536 TMEM269A0A1B0GVZ9 245 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 TMEM129A0AVI4 362 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 E7EQL1 145 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 E9PI62 339 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 CTAG2O75638 210 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 ANXA2P07355 339 aaKnown RBP14.99□□□□□ -0.01
TUBB3-211ENST00000556536 TACSTD2P09758 323 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 THBS4P35443 961 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 MAP2K4P45985 399 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 RGS6P49758 472 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 MSMPQ1L6U9 139 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 KCTD21Q4G0X4 260 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 SPATA46Q5T0L3 261 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 VHLLQ6RSH7 139 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 ARL9Q6T311 187 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 TMPRSS11AQ6ZMR5 421 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 FAM57BQ71RH2 274 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 FAM220AQ7Z4H9 259 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 NANOGP1Q8N7R0 232 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 NUP37Q8NFH4 326 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 OR52N1Q8NH53 320 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 GATAD2BQ8WXI9 593 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 POU2F3Q9UKI9 436 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 SPEF1Q9Y4P9 236 aa14.99□□□□□ -0.01
TUBB3-211ENST00000556536 TRIM64A6NGJ6 449 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 GOSR1O95249 250 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 APOC1P02654 83 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 MT-ND5P03915 603 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 LCKP06239 509 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 RAD52P43351 418 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 MMP16P51512 607 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 PPP1CBP62140 327 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 ZNF829Q3KNS6 432 aaPredicted RBP14.98□□□□□ -0.01
TUBB3-211ENST00000556536 ZNF672Q499Z4 452 aaPredicted RBP14.98□□□□□ -0.01
TUBB3-211ENST00000556536 OR1J1Q8NGS3 322 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 AKAP1Q92667 903 aaKnown RBP eCLIP14.98□□□□□ -0.01
TUBB3-211ENST00000556536 APOBEC3DQ96AK3 386 aaPredicted RBP14.98□□□□□ -0.01
TUBB3-211ENST00000556536 MYCBPQ99417 103 aaPredicted RBP14.98□□□□□ -0.01
TUBB3-211ENST00000556536 G6PC2Q9NQR9 355 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 ERGIC3Q9Y282 383 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 AKAP9Q99996 3911 aa14.98□□□□□ -0.01
TUBB3-211ENST00000556536 LOC110117498-PIK3R3F6TDL0 507 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 MYL12BO14950 172 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 TNFAIP8O95379 198 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 LALBAP00709 142 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 GLRXP35754 106 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 GTF2A1P52655 376 aaPredicted RBP14.97□□□□□ -0.01
TUBB3-211ENST00000556536 NANOS3P60323 173 aaKnown RBP14.97□□□□□ -0.01
TUBB3-211ENST00000556536 TLE4Q04727 773 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 GLYATL3Q5SZD4 288 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 XAF1Q6GPH4 301 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 CATSPERDQ86XM0 798 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 KLBQ86Z14 1044 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 EGFL6Q8IUX8 553 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 PRSS35Q8N3Z0 413 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 OR8B12Q8NGG6 310 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 SLC25A40Q8TBP6 338 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 TMEM171Q8WVE6 324 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 MARS2Q96GW9 593 aaKnown RBP14.97□□□□□ -0.01
TUBB3-211ENST00000556536 PGAM5Q96HS1 289 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 OR5M11Q96RB7 305 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 BCL2L14Q9BZR8 327 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 OR2J1Q9GZK6 312 aa14.97□□□□□ -0.01
TUBB3-211ENST00000556536 PBOV1Q9GZY1 135 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms