RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ELFN2Q5R3F8 820 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 METRNLQ641Q3 311 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 C22orf42Q6IC83 251 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 ACSM6Q6P461 480 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 RPL22L1Q6P5R6 122 aaKnown RBP5.53□□□□□ -1.52
TDP1-215ENST00000556498 TOMM20LQ6UXN7 152 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 WDR82Q6UXN9 313 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 B3GLCTQ6Y288 498 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 SLC35E3Q7Z769 313 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 TMEM217Q8N7C4 229 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 PRELID2Q8N945 189 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 ACOT4Q8N9L9 421 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 SDR9C7Q8NEX9 313 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 OR4D11Q8NGI4 311 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 OR2T35Q8NGX2 323 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 OR13G1Q8NGZ3 307 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 LGALS14Q8TCE9 139 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 DNASE2BQ8WZ79 361 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 OR8D1Q8WZ84 308 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 HOXB13Q92826 284 aaPredicted RBP5.53□□□□□ -1.52
TDP1-215ENST00000556498 MOAP1Q96BY2 351 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 GALMQ96C23 342 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 GPR146Q96CH1 333 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 SNRNP40Q96DI7 357 aaKnown RBP5.53□□□□□ -1.52
TDP1-215ENST00000556498 COQ2Q96H96 371 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 LINC00615Q96LM1 132 aaPredicted RBP5.53□□□□□ -1.52
TDP1-215ENST00000556498 WDR92Q96MX6 357 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 ATOH8Q96SQ7 321 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 ZNF649Q9BS31 505 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 PHF7Q9BWX1 381 aaPredicted RBP5.53□□□□□ -1.52
TDP1-215ENST00000556498 QTRT1Q9BXR0 403 aaKnown RBP5.53□□□□□ -1.52
TDP1-215ENST00000556498 MOB1AQ9H8S9 216 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 TMEM27Q9HBJ8 222 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 TAF9BQ9HBM6 251 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 SLC25A19Q9HC21 320 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 ACOT13Q9NPJ3 140 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 MMP26Q9NRE1 261 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 SLC7A10Q9NS82 523 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 UQCC1Q9NVA1 299 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 GPATCH2LQ9NWQ4 482 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 P2RX2Q9UBL9 471 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 RALYQ9UKM9 306 aaKnown RBP5.53□□□□□ -1.52
TDP1-215ENST00000556498 OSGIN2Q9Y236 505 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 SLC17A4Q9Y2C5 497 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 RNF114Q9Y508 228 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 YIPF1Q9Y548 306 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 USP6P35125 1406 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 TUBGCP6Q96RT7 1819 aa5.53□□□□□ -1.52
TDP1-215ENST00000556498 DISP2A7MBM2 1401 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 DHRS12A0PJE2 317 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 NPIPB13A6NJU9 1138 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 NPIPB4C9JG80 1138 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 KIR2DS3K7RE56 304 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 MFNGO00587 321 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 RS1O15537 224 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 FOXH1O75593 365 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 TNFSF13O75888 250 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 SCGNO76038 276 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 NFATC1O95644 943 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 HBZP02008 142 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 ORM1P02763 201 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 OPN1SWP03999 348 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 H2AFZP0C0S5 128 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 C1QTNF9P0C862 333 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 TMEM225BP0DP42 221 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 FABP4P15090 132 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 AZU1P20160 251 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 CFHR2P36980 270 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 CDKN1AP38936 164 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 PBX3P40426 434 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 GABRA2P47869 451 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 METAP2P50579 478 aaKnown RBP eCLIP5.52□□□□□ -1.53
TDP1-215ENST00000556498 CAV2P51636 162 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 GAS1P54826 345 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 TAS2R30P59541 319 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 UBE2KP61086 200 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 SLC35A2P78381 396 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 FABP5Q01469 135 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 CRYZQ08257 329 aaKnown RBP5.52□□□□□ -1.53
TDP1-215ENST00000556498 SCAPQ12770 1279 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 TCP10Q12799 353 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 MLLT11Q13015 90 aaPredicted RBP5.52□□□□□ -1.53
TDP1-215ENST00000556498 FZD2Q14332 565 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 KIR2DS3Q14952 304 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 TMEM132DQ14C87 1099 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 ZNF79Q15937 498 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 SPIN4Q56A73 249 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 CT83Q5H943 113 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 PRR31Q5SQ13 230 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 TPTE2P1Q5T6R2 138 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 WDR25Q64LD2 544 aaPredicted RBP5.52□□□□□ -1.53
TDP1-215ENST00000556498 ZNF660Q6AZW8 331 aaPredicted RBP5.52□□□□□ -1.53
TDP1-215ENST00000556498 GRHL2Q6ISB3 625 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 ALKAL2Q6UX46 152 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 H2AFVQ71UI9 128 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 WDR53Q7Z5U6 358 aaPredicted RBP5.52□□□□□ -1.53
TDP1-215ENST00000556498 PTAR1Q7Z6K3 402 aaPredicted RBP5.52□□□□□ -1.53
TDP1-215ENST00000556498 APOBEC3FQ8IUX4 373 aaKnown RBP5.52□□□□□ -1.53
TDP1-215ENST00000556498 C9orf40Q8IXQ3 194 aa5.52□□□□□ -1.53
TDP1-215ENST00000556498 C20orf196Q8IYI0 205 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms