RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 SEC61A1P61619 476 aaKnown RBP7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 HNRNPA0Q13151 305 aaKnown RBP7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 SGCAQ16586 387 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 Q6ZR03 302 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 RFPL4BQ6ZWI9 263 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 HDDC2Q7Z4H3 204 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 PATL1Q86TB9 770 aaKnown RBP7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 ICA1LQ8NDH6 482 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 NOXO1Q8NFA2 376 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 AKR7LQ8NHP1 331 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 UPRTQ96BW1 309 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 TAMM41Q96BW9 452 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 C4orf45Q96LM5 186 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 C7orf26Q96N11 449 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 WACQ9BTA9 647 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 KLK15Q9H2R5 256 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 TXNIPQ9H3M7 391 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 KAT8Q9H7Z6 458 aaKnown RBP7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 ELOVL3Q9HB03 270 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 TMEM165Q9HC07 324 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 CCNB1IP1Q9NPC3 277 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 INIPQ9NRY2 104 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 MAN2C1Q9NTJ4 1040 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 ARMCX1Q9P291 453 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 IL20RAQ9UHF4 553 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 ANGPT4Q9Y264 503 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 SOX21Q9Y651 276 aaPredicted RBP7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 KIR2DS1A0A191URI9 304 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 A0A1B0GUS0 222 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 ISPDA4D126 451 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 HTR3EA5X5Y0 456 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 TMEM178BH3BS89 294 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 KPNA4O00629 521 aaPredicted RBP7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 IGHV4-38-2P0DP08 117 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 COX5BP10606 129 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 PF4V1P10720 104 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 LAP3P28838 519 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 MTNR1AP48039 350 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 ELLP55199 621 aaPredicted RBP7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 STX1BP61266 288 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 PCBD1P61457 104 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 BTG1P62324 171 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 TNFAIP6P98066 277 aaPredicted RBP7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 SELPLGQ14242 412 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 ZMYND11Q15326 602 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 TAF11Q15544 211 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 AGKQ53H12 422 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 ARMCX4Q5H9R4 360 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 ZNF774Q6NX45 483 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 NANOGNBQ7Z5D8 188 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 ZER1Q7Z7L7 766 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 NKAIN4Q8IVV8 208 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 SLC30A8Q8IWU4 369 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 LRRC75AQ8NAA5 344 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 OR52E2Q8NGJ4 325 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 MOSPD2Q8NHP6 518 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 C10orf82Q8WW14 230 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 TAF15Q92804 592 aaKnown RBP eCLIP7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 TMIGD2Q96BF3 282 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 ZBTB9Q96C00 473 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 TLCD1Q96CP7 247 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 HAVCR1Q96D42 359 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 RBP7Q96R05 134 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 CGREF1Q99674 301 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 EBF4Q9BQW3 602 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 ALG12Q9BV10 488 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 C20orf141Q9NUB4 165 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 IL19Q9UHD0 177 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 RIMS3Q9UJD0 308 aa7.46□□□□□ -1.22
GTF2A1-204ENST00000556268 POLR3GO15318 223 aaPredicted RBP7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 IGLV2-14P01704 120 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 OPN1SWP03999 348 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 UMPSP11172 480 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 MDKP21741 143 aaPredicted RBP7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 MDH2P40926 338 aaKnown RBP7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 ARHGDIAP52565 204 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 BPIFB3P59826 476 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 MAGOHP61326 146 aaKnown RBP7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 ERVK-25P63136 954 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 FMODQ06828 376 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 FHL1Q13642 323 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 ENDOGQ14249 297 aaKnown RBP7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 MIDNQ504T8 468 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 ARL9Q6T311 187 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 LRRN1Q6UXK5 716 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 ZNF771Q7L3S4 317 aaPredicted RBP7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 PFN4Q8NHR9 129 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 VANGL1Q8TAA9 524 aaPredicted RBP7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 FNDC8Q8TC99 324 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 TMEM239Q8WW34 195 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 RAB40AQ8WXH6 277 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 NSMAFQ92636 917 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 PTP4A1Q93096 173 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 CMBLQ96DG6 245 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 SGTBQ96EQ0 304 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 POLR2J2Q9GZM3 115 aaKnown RBP7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 MS4A7Q9GZW8 240 aaPredicted RBP7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 POLR2J3Q9H1A7 115 aaKnown RBP7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 NKIRAS1Q9NYS0 192 aa7.45□□□□□ -1.22
GTF2A1-204ENST00000556268 PDP1Q9P0J1 537 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms