RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TNFRSF19Q9NS68 423 aa11.9□□□□□ -0.5
CHMP4BP1-201ENST00000556017 TMEM100Q9NV29 134 aa11.9□□□□□ -0.5
CHMP4BP1-201ENST00000556017 FGFR1OP2Q9NVK5 253 aa11.9□□□□□ -0.5
CHMP4BP1-201ENST00000556017 GID8Q9NWU2 228 aa11.9□□□□□ -0.5
CHMP4BP1-201ENST00000556017 NDUFAF4Q9P032 175 aa11.9□□□□□ -0.5
CHMP4BP1-201ENST00000556017 B9D1Q9UPM9 204 aa11.9□□□□□ -0.5
CHMP4BP1-201ENST00000556017 TMEM5Q9Y2B1 443 aa11.9□□□□□ -0.5
CHMP4BP1-201ENST00000556017 SASH3O75995 380 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SERPINA1P01009 418 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 KNG1P01042 644 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 PSKH1P11801 424 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 IFNA8P32881 189 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 GGT2P36268 569 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 GSK3BP49841 420 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ASPHD2Q6ICH7 369 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 FAM86B1Q8N7N1 296 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 CELF2-AS1Q8N7Q2 184 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 GJC3Q8NFK1 279 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RSRC1Q96IZ7 334 aaKnown RBP11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SIRPDQ9H106 197 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 NOX4Q9NPH5 578 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 UFSP2Q9NUQ7 469 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ARMCX1Q9P291 453 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RPS6KA6Q9UK32 745 aa11.89□□□□□ -0.51
CHMP4BP1-201ENST00000556017 A0A1B0GUS0 222 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 CLPSL1A2RUU4 121 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ZNF879B4DU55 563 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SLC7A2P52569 658 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 BPIFB3P59826 476 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 MAPRE2Q15555 327 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ZNF362Q5T0B9 420 aaPredicted RBP11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DPY19L2P2Q6ZN68 376 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 NLRC3Q7RTR2 1065 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 LINC00346Q8IVM7 164 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 C1orf87Q8N0U7 546 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 FGFRL1Q8N441 504 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 TMEM86BQ8N661 226 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 LINC01006Q8NI28 216 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 PCGF1Q9BSM1 259 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 BEX1Q9HBH7 125 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 MRPL22Q9NWU5 206 aaKnown RBP11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 CYB5R1Q9UHQ9 305 aa11.88□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DNAH3Q8TD57 4116 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 A0A0G2JK05 382 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 LRRC30A6NM36 301 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ENSAO43768 121 aaKnown RBP11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DIRAS1O95057 198 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 H1F0P07305 194 aaKnown RBP11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 NCK1P16333 377 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 OTX1P32242 354 aaPredicted RBP11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 MDH1P40925 334 aaKnown RBP11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 PROK1P58294 105 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 GPR157Q5UAW9 335 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SFRP4Q6FHJ7 346 aaPredicted RBP11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ZBTB46Q86UZ6 589 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 OR4F5Q8NH21 305 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ZDHHC16Q969W1 377 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ERGIC1Q969X5 290 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SLCO4A1Q96BD0 722 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 MAP6Q96JE9 813 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 WDFY2Q96P53 400 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 NMNAT3Q96T66 252 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RASSF4Q9H2L5 321 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SRA1Q9HD15 236 aaKnown RBP11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 POMT1Q9Y6A1 747 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 CAPN7Q9Y6W3 813 aa11.87□□□□□ -0.51
CHMP4BP1-201ENST00000556017 OR6C68A6NDL8 312 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 UNC119BA6NIH7 251 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 F5H5K5 113 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 P2RY10O00398 339 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ARPC3O15145 178 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 IGHV4-59P01825 116 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 HIST1H1CP16403 213 aaKnown RBP11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 CA6P23280 308 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ELF3P78545 371 aaPredicted RBP11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ZNF92Q03936 586 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 TRAP1Q12931 704 aaKnown RBP11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SNAI3Q3KNW1 292 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 PGM2L1Q6PCE3 622 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 FKBP9P1Q75LS8 142 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 GCSAMQ8N6F7 178 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ZNRF4Q8WWF5 429 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 FAM71F1Q96KD3 344 aaPredicted RBP11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 ERMAPQ96PL5 475 aaPredicted RBP11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 DDOQ99489 341 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RBM4BQ9BQ04 359 aaKnown RBP11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 HCAR1Q9BXC0 346 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 VIPAS39Q9H9C1 493 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 MRGBPQ9NV56 204 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 RNF7Q9UBF6 113 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 POLR1DQ9Y2S0 133 aa11.86□□□□□ -0.51
CHMP4BP1-201ENST00000556017 A0A0U1RQK1 487 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 CD300LBA8K4G0 201 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 C3orf80F5H4A9 247 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 LGALS8O00214 317 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 SLC22A2O15244 555 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 GPR137BO60478 399 aa11.85□□□□□ -0.51
CHMP4BP1-201ENST00000556017 CLPXO76031 633 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms