RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 MNAT1P51948 309 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 TPTEP56180 551 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 KLF17Q5JT82 389 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 BTNL3Q6UXE8 466 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 LRRN1Q6UXK5 716 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 NLRC3Q7RTR2 1065 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 KLBQ86Z14 1044 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 ZDHHC21Q8IVQ6 265 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 C3orf56Q8N813 242 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 PLPP7Q8NBV4 271 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 SDR9C7Q8NEX9 313 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 SGMS2Q8NHU3 365 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 SPTSSAQ969W0 71 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 NEIL1Q96FI4 390 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 CDRT15Q96T59 188 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 DDOQ99489 341 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 MRPL22Q9NWU5 206 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 ARL2BPQ9Y2Y0 163 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 LYVE1Q9Y5Y7 322 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 V9GYQ6 96 aa10.64□□□□□ -0.71
HNRNPC-221ENST00000555883 IGHV2-70DA0A0C4DH43 119 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 F5H5K5 113 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 F5H5P2 479 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 H0YL77 283 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 DCTN3O75935 186 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 HLA-DQA2P01906 255 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 RPS2P15880 293 aaKnown RBP10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 PRTN3P24158 256 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 RAD23AP54725 363 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 FOXL1Q12952 345 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 MAB21L1Q13394 359 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 PCK2Q16822 640 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 ZNF770Q6IQ21 691 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 DCDC5Q6ZRR9 648 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 RASSF6Q6ZTQ3 369 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 PGAP1Q75T13 922 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 ZNF771Q7L3S4 317 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 MOGAT3Q86VF5 341 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 LINC00346Q8IVM7 164 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 ARHGAP24Q8N264 748 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 BHLHE23Q8NDY6 225 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 OR52E2Q8NGJ4 325 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 OR4C15Q8NGM1 316 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 OR2T4Q8NH00 348 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 ZNF420Q8TAQ5 688 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 UPRTQ96BW1 309 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 MAP6Q96JE9 813 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 TMEM246Q9BRR3 403 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 PLA2G12AQ9BZM1 189 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 FAM107BQ9H098 131 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 OPA3Q9H6K4 179 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 ACTR3BQ9P1U1 418 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 PPIAL4AQ9Y536 164 aa10.63□□□□□ -0.71
HNRNPC-221ENST00000555883 KIR2DS1A0A191URI9 304 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 M0R135 149 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 PHYHO14832 338 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 GMDSO60547 372 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 CYB5R3P00387 301 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 PLATP00750 562 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 LCATP04180 440 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 HKR1P10072 659 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 IRF2P14316 349 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 ZNF823P16415 610 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 CD80P33681 288 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 BPIFB3P59826 476 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 GNB2P62879 340 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 HNRNPA0Q13151 305 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 GK3PQ14409 553 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 KCNJ8Q15842 424 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 AWAT1Q58HT5 328 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 TEX30Q5JUR7 227 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 ZNF362Q5T0B9 420 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 DRAM2Q6UX65 266 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 MRPL21Q7Z2W9 205 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 PIGWQ7Z7B1 504 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 DEFB107AQ8IZN7 70 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 LNX2Q8N448 690 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 SIGLECL1Q8N7X8 197 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 OR8B3Q8NGG8 313 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 OR10S1Q8NGN2 331 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 RAB40AQ8WXH6 277 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 ZNF799Q96GE5 643 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 OR8B2Q96RD0 313 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 BTBD10Q9BSF8 475 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 MUC13Q9H3R2 512 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 MAGIXQ9H6Y5 334 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 EGLN3Q9H6Z9 239 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 WDR76Q9H967 626 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 TRIM36Q9NQ86 728 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 MRPL15Q9P015 296 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 ZNF69Q9UC07 566 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 BAIAP2Q9UQB8 552 aa10.62□□□□□ -0.71
HNRNPC-221ENST00000555883 TNFRSF11BO00300 401 aa10.61□□□□□ -0.71
HNRNPC-221ENST00000555883 RNASE1P07998 156 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-221ENST00000555883 MSX2P35548 267 aaPredicted RBP10.61□□□□□ -0.71
HNRNPC-221ENST00000555883 PSMB10P40306 273 aa10.61□□□□□ -0.71
HNRNPC-221ENST00000555883 PMELP40967 661 aa10.61□□□□□ -0.71
HNRNPC-221ENST00000555883 MTNR1AP48039 350 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms