RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 P2RY8Q86VZ1 359 aa2.56□□□□□ -2
SRP54-209ENST00000555746 GPBP1Q86WP2 473 aa2.56□□□□□ -2
SRP54-209ENST00000555746 VSTM4Q8IW00 320 aa2.56□□□□□ -2
SRP54-209ENST00000555746 NAXDQ8IW45 347 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ZBED8Q8IZ13 594 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ZNF683Q8IZ20 524 aa2.56□□□□□ -2
SRP54-209ENST00000555746 PDIK1LQ8N165 341 aa2.56□□□□□ -2
SRP54-209ENST00000555746 SLC22A18ASQ8N1D0 253 aa2.56□□□□□ -2
SRP54-209ENST00000555746 GTPBP8Q8N3Z3 284 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 C12orf29Q8N999 325 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ACBD4Q8NC06 268 aa2.56□□□□□ -2
SRP54-209ENST00000555746 FAM83FQ8NEG4 500 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 OR2D3Q8NGH3 330 aa2.56□□□□□ -2
SRP54-209ENST00000555746 WDR36Q8NI36 951 aaKnown RBP2.56□□□□□ -2
SRP54-209ENST00000555746 RNASE11Q8TAA1 199 aaKnown RBP2.56□□□□□ -2
SRP54-209ENST00000555746 FNDC8Q8TC99 324 aa2.56□□□□□ -2
SRP54-209ENST00000555746 TBCKQ8TEA7 893 aa2.56□□□□□ -2
SRP54-209ENST00000555746 KCTD4Q8WVF5 259 aa2.56□□□□□ -2
SRP54-209ENST00000555746 OSTF1Q92882 214 aa2.56□□□□□ -2
SRP54-209ENST00000555746 LHX4Q969G2 390 aa2.56□□□□□ -2
SRP54-209ENST00000555746 BORCS5Q969J3 196 aa2.56□□□□□ -2
SRP54-209ENST00000555746 CPNE4Q96A23 557 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 PPP1R16AQ96I34 528 aa2.56□□□□□ -2
SRP54-209ENST00000555746 PLEKHF1Q96S99 279 aa2.56□□□□□ -2
SRP54-209ENST00000555746 PRRT1Q99946 306 aa2.56□□□□□ -2
SRP54-209ENST00000555746 MAPKAP1Q9BPZ7 522 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ZNF251Q9BRH9 671 aa2.56□□□□□ -2
SRP54-209ENST00000555746 APOOQ9BUR5 198 aa2.56□□□□□ -2
SRP54-209ENST00000555746 C20orf24Q9BUV8 137 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ERVK-6Q9BXR3 956 aa2.56□□□□□ -2
SRP54-209ENST00000555746 SRRQ9GZT4 340 aa2.56□□□□□ -2
SRP54-209ENST00000555746 METTL9Q9H1A3 318 aa2.56□□□□□ -2
SRP54-209ENST00000555746 PIGUQ9H490 435 aa2.56□□□□□ -2
SRP54-209ENST00000555746 RNF41Q9H4P4 317 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 ELOVL6Q9H5J4 265 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ADGRL4Q9HBW9 690 aa2.56□□□□□ -2
SRP54-209ENST00000555746 DHRS4-AS1Q9P1J3 65 aa2.56□□□□□ -2
SRP54-209ENST00000555746 MYEF2Q9P2K5 600 aaKnown RBP2.56□□□□□ -2
SRP54-209ENST00000555746 ZNF639Q9UID6 485 aa2.56□□□□□ -2
SRP54-209ENST00000555746 CLEC4EQ9ULY5 219 aa2.56□□□□□ -2
SRP54-209ENST00000555746 DHRS7Q9Y394 339 aa2.56□□□□□ -2
SRP54-209ENST00000555746 WIF1Q9Y5W5 379 aa2.56□□□□□ -2
SRP54-209ENST00000555746 URGCP-MRPS24S4R325 110 aa2.56□□□□□ -2
SRP54-209ENST00000555746 NRCAMQ92823 1304 aa2.56□□□□□ -2
SRP54-209ENST00000555746 COL4A2P08572 1712 aa2.56□□□□□ -2
SRP54-209ENST00000555746 FOCADQ5VW36 1801 aa2.56□□□□□ -2
SRP54-209ENST00000555746 LCTP09848 1927 aa2.56□□□□□ -2
SRP54-209ENST00000555746 RAI1Q7Z5J4 1906 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 YLPM1P49750 1951 aaKnown RBP2.56□□□□□ -2
SRP54-209ENST00000555746 RP1P56715 2156 aa2.56□□□□□ -2
SRP54-209ENST00000555746 SHANK1Q9Y566 2161 aa2.56□□□□□ -2
SRP54-209ENST00000555746 TMEM213A2RRL7 107 aa2.55□□□□□ -2
SRP54-209ENST00000555746 LRIT2A6NDA9 550 aa2.55□□□□□ -2
SRP54-209ENST00000555746 METTL21EPA6NDL7 271 aa2.55□□□□□ -2
SRP54-209ENST00000555746 ZNF98A6NK75 572 aa2.55□□□□□ -2
SRP54-209ENST00000555746 PPIAL4DF5H284 164 aa2.55□□□□□ -2
SRP54-209ENST00000555746 F8VP50 259 aa2.55□□□□□ -2
SRP54-209ENST00000555746 RNASEK-C17orf49H0YIS7 233 aa2.55□□□□□ -2
SRP54-209ENST00000555746 SMLR1H3BR10 107 aa2.55□□□□□ -2
SRP54-209ENST00000555746 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.55□□□□□ -2
SRP54-209ENST00000555746 RAB29O14966 203 aa2.55□□□□□ -2
SRP54-209ENST00000555746 CLOCKO15516 846 aa2.55□□□□□ -2
SRP54-209ENST00000555746 SRPX2O60687 465 aaPredicted RBP2.55□□□□□ -2
SRP54-209ENST00000555746 SHOX2O60902 331 aaPredicted RBP2.55□□□□□ -2
SRP54-209ENST00000555746 CCNKO75909 580 aa2.55□□□□□ -2
SRP54-209ENST00000555746 KRT75O95678 551 aa2.55□□□□□ -2
SRP54-209ENST00000555746 FADS2O95864 444 aaKnown RBP2.55□□□□□ -2
SRP54-209ENST00000555746 IGSF6O95976 241 aa2.55□□□□□ -2
SRP54-209ENST00000555746 RPN2P04844 631 aa2.55□□□□□ -2
SRP54-209ENST00000555746 CRYGBP07316 175 aa2.55□□□□□ -2
SRP54-209ENST00000555746 COL1A2P08123 1366 aa2.55□□□□□ -2
SRP54-209ENST00000555746 HBQ1P09105 142 aa2.55□□□□□ -2
SRP54-209ENST00000555746 MYH1P12882 1939 aa2.55□□□□□ -2
SRP54-209ENST00000555746 CYP11B1P15538 503 aa2.55□□□□□ -2
SRP54-209ENST00000555746 CD36P16671 472 aa2.55□□□□□ -2
SRP54-209ENST00000555746 TPSB2P20231 275 aa2.55□□□□□ -2
SRP54-209ENST00000555746 CRABP1P29762 137 aa2.55□□□□□ -2
SRP54-209ENST00000555746 OR1E1P30953 314 aa2.55□□□□□ -2
SRP54-209ENST00000555746 HNRNPH3P31942 346 aaKnown RBP2.55□□□□□ -2
SRP54-209ENST00000555746 PRDX2P32119 198 aa2.55□□□□□ -2
SRP54-209ENST00000555746 OTX1P32242 354 aaPredicted RBP2.55□□□□□ -2
SRP54-209ENST00000555746 NUDT1P36639 197 aa2.55□□□□□ -2
SRP54-209ENST00000555746 PTGFRP43088 359 aa2.55□□□□□ -2
SRP54-209ENST00000555746 STK19P49842 368 aaPredicted RBP2.55□□□□□ -2
SRP54-209ENST00000555746 ERFP50548 548 aa2.55□□□□□ -2
SRP54-209ENST00000555746 TPMTP51580 245 aa2.55□□□□□ -2
SRP54-209ENST00000555746 CCR8P51685 355 aa2.55□□□□□ -2
SRP54-209ENST00000555746 NAPAP54920 295 aa2.55□□□□□ -2
SRP54-209ENST00000555746 OR2B6P58173 313 aa2.55□□□□□ -2
SRP54-209ENST00000555746 TAS2R60P59551 318 aa2.55□□□□□ -2
SRP54-209ENST00000555746 PSME3P61289 254 aa2.55□□□□□ -2
SRP54-209ENST00000555746 AKAP6Q13023 2319 aa2.55□□□□□ -2
SRP54-209ENST00000555746 TRIP10Q15642 601 aa2.55□□□□□ -2
SRP54-209ENST00000555746 TPSAB1Q15661 275 aa2.55□□□□□ -2
SRP54-209ENST00000555746 ZNF239Q16600 458 aaKnown RBP2.55□□□□□ -2
SRP54-209ENST00000555746 IMPG1Q17R60 797 aa2.55□□□□□ -2
SRP54-209ENST00000555746 MS4A13Q5J8X5 152 aa2.55□□□□□ -2
SRP54-209ENST00000555746 HACD4Q5VWC8 232 aa2.55□□□□□ -2
SRP54-209ENST00000555746 ASPHD2Q6ICH7 369 aa2.55□□□□□ -2
SRP54-209ENST00000555746 CBLN3Q6UW01 205 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms