RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ANGPT1Q15389 498 aa21.44■■□□□ 1.02
TMEM260-207ENST00000555497 ACER2Q5QJU3 275 aa21.44■■□□□ 1.02
TMEM260-207ENST00000555497 NAA11Q9BSU3 229 aaPredicted RBP21.44■■□□□ 1.02
TMEM260-207ENST00000555497 DEPPQ9NTK1 212 aa21.44■■□□□ 1.02
TMEM260-207ENST00000555497 FOXJ2Q9P0K8 574 aa21.44■■□□□ 1.02
TMEM260-207ENST00000555497 AHCTF1Q8WYP5 2266 aa21.44■■□□□ 1.02
TMEM260-207ENST00000555497 WIPF3A6NGB9 483 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 LRRC3CA6NJW4 275 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 PRAF2O60831 178 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 JMJD7P0C870 316 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 GTF2F2P13984 249 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 CX3CR1P49238 355 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 CSNK2A1P68400 391 aaPredicted RBP21.43■■□□□ 1.02
TMEM260-207ENST00000555497 C10orf128Q5T292 105 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 PAQR4Q8N4S7 273 aaPredicted RBP21.43■■□□□ 1.02
TMEM260-207ENST00000555497 CLEC1AQ8NC01 280 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 PSMF1Q92530 271 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 ZNF775Q96BV0 537 aaPredicted RBP21.43■■□□□ 1.02
TMEM260-207ENST00000555497 TMEM138Q9NPI0 162 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 TAS2R8Q9NYW2 309 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 PYCARD-AS1I3L0S3 204 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 CDX4O14627 284 aaPredicted RBP21.43■■□□□ 1.02
TMEM260-207ENST00000555497 VAMP5O95183 116 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 F10P00742 488 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 CD3DP04234 171 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 ENDOGQ14249 297 aaKnown RBP21.43■■□□□ 1.02
TMEM260-207ENST00000555497 PLA2G2CQ5R387 149 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 GLDNQ6ZMI3 551 aaPredicted RBP21.43■■□□□ 1.02
TMEM260-207ENST00000555497 ABHD12BQ7Z5M8 362 aaPredicted RBP21.43■■□□□ 1.02
TMEM260-207ENST00000555497 CDH24Q86UP0 819 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 NAA40Q86UY6 237 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 NABP1Q96AH0 204 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 FOXRED1Q96CU9 486 aaPredicted RBP21.43■■□□□ 1.02
TMEM260-207ENST00000555497 ZPBPQ9BS86 351 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 MOB1AQ9H8S9 216 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 GPR84Q9NQS5 396 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 NPDC1Q9NQX5 325 aaPredicted RBP21.43■■□□□ 1.02
TMEM260-207ENST00000555497 EMC3Q9P0I2 261 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 ING4Q9UNL4 249 aa21.43■■□□□ 1.02
TMEM260-207ENST00000555497 SMAD9O15198 467 aaKnown RBP21.42■■□□□ 1.02
TMEM260-207ENST00000555497 ZNF780AO75290 641 aaPredicted RBP21.42■■□□□ 1.02
TMEM260-207ENST00000555497 SRD5A2P31213 254 aa21.42■■□□□ 1.02
TMEM260-207ENST00000555497 ZNF133P52736 654 aaPredicted RBP21.42■■□□□ 1.02
TMEM260-207ENST00000555497 GALK2Q01415 458 aa21.42■■□□□ 1.02
TMEM260-207ENST00000555497 PMPCAQ10713 525 aa21.42■■□□□ 1.02
TMEM260-207ENST00000555497 METTL11BQ5VVY1 283 aa21.42■■□□□ 1.02
TMEM260-207ENST00000555497 ZNF782Q6ZMW2 699 aaPredicted RBP21.42■■□□□ 1.02
TMEM260-207ENST00000555497 FAM57BQ71RH2 274 aa21.42■■□□□ 1.02
TMEM260-207ENST00000555497 BEST3Q8N1M1 668 aa21.42■■□□□ 1.02
TMEM260-207ENST00000555497 OR5D14Q8NGL3 314 aa21.42■■□□□ 1.02
TMEM260-207ENST00000555497 OR8S1Q8NH09 359 aa21.42■■□□□ 1.02
TMEM260-207ENST00000555497 ZNF837Q96EG3 531 aaPredicted RBP21.42■■□□□ 1.02
TMEM260-207ENST00000555497 DLL4Q9NR61 685 aa21.42■■□□□ 1.02
TMEM260-207ENST00000555497 LSM6P62312 80 aaKnown RBP21.41■■□□□ 1.02
TMEM260-207ENST00000555497 QRFPP83859 136 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 UNC119Q13432 240 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 ACBD4Q8NC06 268 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 DDA1Q9BW61 102 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 GON7Q9BXV9 100 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 FOXD3Q9UJU5 478 aaPredicted RBP21.41■■□□□ 1.02
TMEM260-207ENST00000555497 MGAT4AQ9UM21 535 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 PINLYPA6NC86 204 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 TNFRSF10AO00220 468 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 SERPINA7P05543 415 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 VSIG10L2P0DP72 767 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 MSR1P21757 451 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 NTF4P34130 210 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 FAUP35544 74 aaKnown RBP21.41■■□□□ 1.02
TMEM260-207ENST00000555497 MECP2P51608 486 aaKnown RBP21.41■■□□□ 1.02
TMEM260-207ENST00000555497 FOXL2NBQ6ZUU3 175 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 COMMD2Q86X83 199 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 ZNF283Q8N7M2 679 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 OR51S1Q8NGJ8 323 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 OR14L1PQ8NHC6 308 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 NKD1Q969G9 470 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 PTX4Q96A99 478 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 SPACA5Q96QH8 159 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 NELFAQ9H3P2 528 aa21.41■■□□□ 1.02
TMEM260-207ENST00000555497 AKAIN1P0CW23 69 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 RAB3AP20336 220 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 GGNQ86UU5 652 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 LRRC18Q8N456 261 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 SLC22A24Q8N4F4 322 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 FAM71F1Q96KD3 344 aaPredicted RBP21.4■■□□□ 1.02
TMEM260-207ENST00000555497 B3GNT4Q9C0J1 378 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 METTL17Q9H7H0 456 aaPredicted RBP21.4■■□□□ 1.02
TMEM260-207ENST00000555497 SLC5A6Q9Y289 635 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 NPTNQ9Y639 398 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 OR5H15A6NDH6 313 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 DHHO43323 396 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 LPLP06858 475 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 STARP49675 285 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 OR5AS1Q8N127 324 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 GRPEL2Q8TAA5 225 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 CMBLQ96DG6 245 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 GINS4Q9BRT9 223 aa21.4■■□□□ 1.02
TMEM260-207ENST00000555497 RBM24Q9BX46 236 aaKnown RBP21.4■■□□□ 1.02
TMEM260-207ENST00000555497 ZNF436Q9C0F3 470 aaPredicted RBP21.4■■□□□ 1.02
TMEM260-207ENST00000555497 ZNF20P17024 532 aa21.39■■□□□ 1.01
TMEM260-207ENST00000555497 RAB6AP20340 208 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms