RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 RGS9O75916 674 aaPredicted RBP8.89□□□□□ -0.99
NEK9-205ENST00000555405 PLATP00750 562 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 GABRA5P31644 462 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 TIMP3P35625 211 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 SPOCK1Q08629 439 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 SNAI3Q3KNW1 292 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 DMKNQ6E0U4 476 aaPredicted RBP8.89□□□□□ -0.99
NEK9-205ENST00000555405 OR8B12Q8NGG6 310 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 NANOS1Q8WY41 292 aaKnown RBP8.89□□□□□ -0.99
NEK9-205ENST00000555405 BCL2L2Q92843 193 aaPredicted RBP8.89□□□□□ -0.99
NEK9-205ENST00000555405 MED18Q9BUE0 208 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 RBM38Q9H0Z9 239 aaKnown RBP8.89□□□□□ -0.99
NEK9-205ENST00000555405 TCF7L1Q9HCS4 588 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 PLSCR4Q9NRQ2 329 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 NDUFB11Q9NX14 153 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 OR4C45A6NMZ5 311 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 FZD7O75084 574 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 MYL9P24844 172 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 TMBIM6P55061 237 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 HNRNPA0Q13151 305 aaKnown RBP8.89□□□□□ -0.99
NEK9-205ENST00000555405 ZMAT1Q5H9K5 638 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 STAC2Q6ZMT1 411 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 OR5AS1Q8N127 324 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 GPR148Q8TDV2 347 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 KCNJ15Q99712 375 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 ACTR6Q9GZN1 396 aa8.89□□□□□ -0.99
NEK9-205ENST00000555405 LOC100509620A0A075B734 347 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 HSPB2A8KAH6 182 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 E9PLN8 166 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 RPS19P39019 145 aaKnown RBP8.88□□□□□ -0.99
NEK9-205ENST00000555405 CLDN12P56749 244 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 OR10A3P58181 314 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 HLXQ14774 488 aaPredicted RBP8.88□□□□□ -0.99
NEK9-205ENST00000555405 HSPB2Q16082 182 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 GABRA6Q16445 453 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 HSD17B12Q53GQ0 312 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 IDNKQ5T6J7 187 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 METAP1DQ6UB28 335 aaPredicted RBP8.88□□□□□ -0.99
NEK9-205ENST00000555405 TMEM91Q6ZNR0 172 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 BATF2Q8N1L9 274 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 TRMT10AQ8TBZ6 339 aaKnown RBP8.88□□□□□ -0.99
NEK9-205ENST00000555405 PLPP2O43688 288 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 SLC2A2P11168 524 aaPredicted RBP8.88□□□□□ -0.99
NEK9-205ENST00000555405 ZNF20P17024 532 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 GRB2P62993 217 aaKnown RBP8.88□□□□□ -0.99
NEK9-205ENST00000555405 RAB35Q15286 201 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 TEX30Q5JUR7 227 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 MYPOPQ86VE0 399 aaPredicted RBP8.88□□□□□ -0.99
NEK9-205ENST00000555405 GABRG1Q8N1C3 465 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 PAQR4Q8N4S7 273 aaPredicted RBP8.88□□□□□ -0.99
NEK9-205ENST00000555405 MS4A15Q8N5U1 240 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 ST6GALNAC3Q8NDV1 305 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 SLC30A7Q8NEW0 376 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 RFT1Q96AA3 541 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 PGLYRP3Q96LB9 341 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 HDHD2Q9H0R4 259 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 PLGRKTQ9HBL7 147 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 PTTG3PQ9NZH4 202 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 COMMD3Q9UBI1 195 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 DAPK2Q9UIK4 370 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 HHLA2Q9UM44 414 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 MEMO1Q9Y316 297 aa8.88□□□□□ -0.99
NEK9-205ENST00000555405 A0A0B4J203 849 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 GABARAPO95166 117 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 CD2P06729 351 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 ACSM4P0C7M7 580 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 GRNP28799 593 aaKnown RBP8.87□□□□□ -0.99
NEK9-205ENST00000555405 FABP6P51161 128 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 ROM1Q03395 351 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 HGFACQ04756 655 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 ZNF684Q5T5D7 378 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 OR13C9Q8NGT0 318 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 LINC01560Q8TB33 94 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 DVL3Q92997 716 aaPredicted RBP8.87□□□□□ -0.99
NEK9-205ENST00000555405 TSC22D3Q99576 134 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 DOK1Q99704 481 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 SFXN3Q9BWM7 321 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 ELL3Q9HB65 397 aaPredicted RBP8.87□□□□□ -0.99
NEK9-205ENST00000555405 ZNF224Q9NZL3 707 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 SF3B6Q9Y3B4 125 aaKnown RBP8.87□□□□□ -0.99
NEK9-205ENST00000555405 A8MXE2 369 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 OGG1O15527 345 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 ZNF254O75437 659 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 TTRP02766 147 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 HOXD4P09016 255 aaPredicted RBP8.87□□□□□ -0.99
NEK9-205ENST00000555405 FAHP16930 419 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 CEACAM8P31997 349 aaPredicted RBP8.87□□□□□ -0.99
NEK9-205ENST00000555405 ARR3P36575 388 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 CA7P43166 264 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 TAB1Q15750 504 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 ALKBH6Q3KRA9 238 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 HES5Q5TA89 166 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 RNLSQ5VYX0 342 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 JAGN1Q8N5M9 183 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 KBTBD8Q8NFY9 601 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 RGP1Q92546 391 aaPredicted RBP8.87□□□□□ -0.99
NEK9-205ENST00000555405 VKORC1Q9BQB6 163 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 GP6Q9HCN6 339 aa8.87□□□□□ -0.99
NEK9-205ENST00000555405 PNRC2Q9NPJ4 139 aaKnown RBP8.87□□□□□ -0.99
NEK9-205ENST00000555405 DUSP13Q9UII6 198 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms