RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 HLXQ14774 488 aaPredicted RBP9.98□□□□□ -0.81
VRK1-204ENST00000555351 SPRNQ5BIV9 151 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 DCAF12L2Q5VW00 463 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 FAHD2BQ6P2I3 314 aaPredicted RBP9.98□□□□□ -0.81
VRK1-204ENST00000555351 USP43Q70EL4 1123 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 C1QL2Q7Z5L3 287 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.98□□□□□ -0.81
VRK1-204ENST00000555351 LINC00346Q8IVM7 164 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 ADGRG5Q8IZF4 528 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 C1orf87Q8N0U7 546 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 ATG16L2Q8NAA4 619 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 CYB561A3Q8NBI2 242 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 OR10G2Q8NGC3 310 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 GIPC3Q8TF64 312 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 ZNF799Q96GE5 643 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 FAHD2AQ96GK7 314 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 MEGF10Q96KG7 1140 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 THTPAQ9BU02 230 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 CHID1Q9BWS9 393 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 TMPRSS13Q9BYE2 586 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 FN3KQ9H479 309 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 YY1AP1Q9H869 796 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 PATZ1Q9HBE1 687 aaKnown RBP9.98□□□□□ -0.81
VRK1-204ENST00000555351 LPAR2Q9HBW0 351 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 TMEM100Q9NV29 134 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 PCDHB10Q9UN67 800 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 COMMD3-BMI1R4GMX3 469 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 U3KQV3 271 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 DYSFO75923 2080 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 DHRS12A0PJE2 317 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 ISPDA4D126 451 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 LRRC30A6NM36 301 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 F5H0A9 414 aaPredicted RBP9.97□□□□□ -0.81
VRK1-204ENST00000555351 TMEM178BH3BS89 294 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 APOC1P02654 83 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 SBK2P0C263 348 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 SPI1P17947 270 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 PYCR1P32322 319 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 SLC6A9P48067 706 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 MMP16P51512 607 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 CRMP1Q14194 572 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 PGAP1Q75T13 922 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 KLBQ86Z14 1044 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 PLPP7Q8NBV4 271 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 OR10S1Q8NGN2 331 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 OR4Q3Q8NH05 313 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 TEX47Q8TBZ9 253 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 Q8TCH9 128 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 CCDC124Q96CT7 223 aaKnown RBP9.97□□□□□ -0.81
VRK1-204ENST00000555351 FEVQ99581 238 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
VRK1-204ENST00000555351 TOR3AQ9H497 397 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 METTL17Q9H7H0 456 aaPredicted RBP9.97□□□□□ -0.81
VRK1-204ENST00000555351 SP140LQ9H930 580 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 LRCH1Q9Y2L9 728 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 SVEP1Q4LDE5 3571 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 STAB1Q9NY15 2570 aa9.97□□□□□ -0.81
VRK1-204ENST00000555351 ZNF878C9JN71 531 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 ZNF593O00488 134 aaPredicted RBP9.96□□□□□ -0.82
VRK1-204ENST00000555351 GYG2O15488 501 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 MLNRO43193 412 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 GMDSO60547 372 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 PTBP3O95758 552 aaKnown RBP9.96□□□□□ -0.82
VRK1-204ENST00000555351 DDOSTP39656 456 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 CD200P41217 278 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 SLC15A1P46059 708 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 GRB2P62993 217 aaKnown RBP9.96□□□□□ -0.82
VRK1-204ENST00000555351 ZMYND11Q15326 602 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 C1orf229Q6ZS94 237 aaPredicted RBP9.96□□□□□ -0.82
VRK1-204ENST00000555351 MRPL21Q7Z2W9 205 aaKnown RBP9.96□□□□□ -0.82
VRK1-204ENST00000555351 DCXRQ7Z4W1 244 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 OR5AS1Q8N127 324 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 SPERTQ8NA61 448 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 PAPD5Q8NDF8 572 aaKnown RBP9.96□□□□□ -0.82
VRK1-204ENST00000555351 NANPQ8TBE9 248 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 BCAS4Q8TDM0 211 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 ZNF418Q8TF45 676 aaPredicted RBP9.96□□□□□ -0.82
VRK1-204ENST00000555351 CANT1Q8WVQ1 401 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 ZNRF4Q8WWF5 429 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 DNAJC9Q8WXX5 260 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 CLPTM1LQ96KA5 538 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 KCNJ15Q99712 375 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 NIPSNAP1Q9BPW8 284 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 C19orf24Q9BVV8 132 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 MARCH7Q9H992 704 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 ARMC1Q9NVT9 282 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 UBAP1Q9NZ09 502 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 MRPL15Q9P015 296 aaKnown RBP9.96□□□□□ -0.82
VRK1-204ENST00000555351 DNHD1Q96M86 4753 aa9.96□□□□□ -0.82
VRK1-204ENST00000555351 TCRBV3S1A0A5B6 114 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 TVP23AA6NH52 213 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 CD300LBA8K4G0 201 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 GNGT2O14610 69 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 XRCC2O43543 280 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 SOX14O95416 240 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 FSHBP01225 129 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 HMGN1P05114 100 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 ANXA8P13928 327 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 ADRA2CP18825 462 aa9.95□□□□□ -0.82
VRK1-204ENST00000555351 PAICSP22234 425 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms