RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 IGHV4-61A0A0C4DH41 118 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 ZNF878C9JN71 531 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 H0YL77 283 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 H3BSA7 217 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 DLGAP1O14490 977 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 WNT9BO14905 357 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 MAGEB4O15481 346 aaPredicted RBP10.5□□□□□ -0.73
SYNE2-214ENST00000554928 RP2O75695 350 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 FOSL1P15407 271 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 SLC6A9P48067 706 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 CX3CR1P49238 355 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 RGS6P49758 472 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 TPTEP56180 551 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 SELENOVP59797 346 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 GK2Q14410 553 aaPredicted RBP10.5□□□□□ -0.73
SYNE2-214ENST00000554928 RCN1Q15293 331 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 TRIP10Q15642 601 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 GLYATL3Q5SZD4 288 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 LPCAT4Q643R3 524 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 LRRN1Q6UXK5 716 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 FBXW12Q6X9E4 464 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 SHFQ7M4L6 423 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 SLC16A9Q7RTY1 509 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 ZNF786Q8N393 782 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 BHLHE23Q8NDY6 225 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 FAM81AQ8TBF8 368 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 THEM6Q8WUY1 208 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 SNX33Q8WV41 574 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 SPTSSAQ969W0 71 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 EME1Q96AY2 570 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 ZNF582Q96NG8 517 aaPredicted RBP10.5□□□□□ -0.73
SYNE2-214ENST00000554928 TEX12Q9BXU0 123 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 ADGRL4Q9HBW9 690 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 DCAF16Q9NXF7 216 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 CR1P17927 2039 aa10.5□□□□□ -0.73
SYNE2-214ENST00000554928 CHD3Q12873 2000 aaKnown RBP10.5□□□□□ -0.73
SYNE2-214ENST00000554928 CSPG4Q6UVK1 2322 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 LYNP07948 512 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 ANPEPP15144 967 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 RAC2P15153 192 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 ALOX5APP20292 161 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 NR4A2P43354 598 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 DSCR9P59020 149 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 ZNF92Q03936 586 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 CDK5R2Q13319 367 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 RIN1Q13671 783 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 GGTLC2Q14390 218 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 TAF13Q15543 124 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 LRRC36Q1X8D7 754 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 NXNL2Q5VZ03 156 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 UNQ6126/PRO20091Q6UXV3 157 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 ZBTB49Q6ZSB9 765 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 SSX6Q7RTT6 188 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 ZNF283Q8N7M2 679 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 STMN2Q93045 179 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 SOX7Q9BT81 388 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 C9orf16Q9BUW7 83 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 BRD7Q9NPI1 651 aa10.49□□□□□ -0.73
SYNE2-214ENST00000554928 ZNF275Q9NSD4 429 aaPredicted RBP10.49□□□□□ -0.73
SYNE2-214ENST00000554928 FBXO9Q9UK97 447 aaPredicted RBP10.49□□□□□ -0.73
SYNE2-214ENST00000554928 IGHV3-64DA0A0J9YX35 117 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 LOC390937A0A1W2PQ73 354 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 LRP5LA4QPB2 252 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 J3QW42 95 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 MLNRO43193 412 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 ENTPD6O75354 484 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 ANXA2P07355 339 aaKnown RBP10.48□□□□□ -0.73
SYNE2-214ENST00000554928 CSF3P09919 207 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 H2BFMP0C1H6 154 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 SLC25A16P16260 332 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 SELEP16581 610 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 PEX2P28328 305 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 IL2RGP31785 369 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 ZNF121P58317 390 aaPredicted RBP10.48□□□□□ -0.73
SYNE2-214ENST00000554928 LCN1P1Q5VSP4 162 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 DRAM2Q6UX65 266 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 CLEC9AQ6UXN8 241 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 USP51Q70EK9 711 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 FAM57BQ71RH2 274 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 BIVMQ86UB2 503 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 C10orf67Q8IYJ2 551 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 C1orf174Q8IYL3 243 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 GALNT4Q8N4A0 578 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 OR2Z1Q8NG97 314 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 OR10AD1Q8NGE0 317 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 OR51G2Q8NGK0 314 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 RDH5Q92781 318 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 DVL3Q92997 716 aaPredicted RBP10.48□□□□□ -0.73
SYNE2-214ENST00000554928 PPP1R14AQ96A00 147 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 HRASLS5Q96KN8 279 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 CNN2Q99439 309 aaKnown RBP10.48□□□□□ -0.73
SYNE2-214ENST00000554928 PIMREGQ9BSJ6 248 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 PRRG3Q9BZD7 231 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 PPP1R3EQ9H7J1 279 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 NKIRAS2Q9NYR9 191 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 ENOPH1Q9UHY7 261 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 GPR160Q9UJ42 338 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 LRP12Q9Y561 859 aa10.48□□□□□ -0.73
SYNE2-214ENST00000554928 PLSCR5A0PG75 271 aa10.47□□□□□ -0.73
SYNE2-214ENST00000554928 IQCF6A8MYZ5 107 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms