RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ELMOD3Q96FG2 381 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 C4orf45Q96LM5 186 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 SFXN2Q96NB2 322 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 SPSB2Q99619 263 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 GFI1Q99684 422 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 NUDT16L1Q9BRJ7 211 aaKnown RBP9.9□□□□□ -0.82
SRP54-205ENST00000554803 VN1R1Q9GZP7 353 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 OR10A5Q9H207 317 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 OR10A4Q9H209 315 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 SLC25A32Q9H2D1 315 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 NARFLQ9H6Q4 476 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 ZNF224Q9NZL3 707 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 OPN4Q9UHM6 478 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 PLEKHA6Q9Y2H5 1048 aa9.9□□□□□ -0.82
SRP54-205ENST00000554803 TMA7Q9Y2S6 64 aaKnown RBP9.9□□□□□ -0.82
SRP54-205ENST00000554803 IGKV1D-42A0A075B6H8 117 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 FRG2CA6NGY1 282 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 KIAA1324LA8MWY0 1029 aaPredicted RBP9.89□□□□□ -0.83
SRP54-205ENST00000554803 H3BUI4 141 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 ZNF264O43296 627 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 IGKV1D-16P01601 117 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 IGHMP01871 453 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 LPLP06858 475 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 UMODP07911 640 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 NUP62P37198 522 aaPredicted RBP9.89□□□□□ -0.83
SRP54-205ENST00000554803 RAD52P43351 418 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 GSK3AP49840 483 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 SELENOPP49908 381 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 CASP6P55212 293 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 NANOS3P60323 173 aaKnown RBP9.89□□□□□ -0.83
SRP54-205ENST00000554803 CTXN1P60606 82 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 ERVK-25P63136 954 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 SKP2Q13309 424 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 ZNF345Q14585 488 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 TOMM34Q15785 309 aaPredicted RBP9.89□□□□□ -0.83
SRP54-205ENST00000554803 SLC18B1Q6NT16 456 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 FAHD2BQ6P2I3 314 aaPredicted RBP9.89□□□□□ -0.83
SRP54-205ENST00000554803 DNM1P34Q6PK57 102 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 DEGS2Q6QHC5 323 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 NPSR1Q6W5P4 371 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 LANCL3Q6ZV70 420 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 PRSS45Q7RTY3 260 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 ZAR1Q86SH2 424 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 PDZD9Q8IXQ8 264 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 CCDC36Q8IYA8 594 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 RFLNBQ8N5W9 214 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 NKAIN3Q8N8D7 197 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 ZNF615Q8N8J6 731 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 OR2AK2Q8NG84 335 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 OR6M1Q8NGM8 313 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 OTOSQ8NHW6 89 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 RGP1Q92546 391 aaPredicted RBP9.89□□□□□ -0.83
SRP54-205ENST00000554803 FAHD2AQ96GK7 314 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 TGIF2Q9GZN2 237 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 ADAM19Q9H013 955 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 ANKRD10Q9NXR5 420 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 NKIRAS2Q9NYR9 191 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 MRM2Q9UI43 246 aaKnown RBP9.89□□□□□ -0.83
SRP54-205ENST00000554803 MKL2Q9ULH7 1088 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 ADAM18Q9Y3Q7 739 aa9.89□□□□□ -0.83
SRP54-205ENST00000554803 EXPH5Q8NEV8 1989 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 TRAV36DV7A0A075B6V5 113 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 A0A1B0GVC2 190 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 A6NIN4 97 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 A8MUA0 341 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 A8MXK9 166 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 NUDT19A8MXV4 375 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 HRKO00198 91 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 XKRYO14609 159 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 ALOX12BO75342 701 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 ALDOBP05062 364 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 GABRA1P14867 456 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 MGMTP16455 207 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 PGCP20142 388 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 RAB6AP20340 208 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 PSMB10P40306 273 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 CDKN2AP42771 156 aaKnown RBP9.88□□□□□ -0.83
SRP54-205ENST00000554803 MFAP5Q13361 173 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 ZNF267Q14586 743 aaPredicted RBP9.88□□□□□ -0.83
SRP54-205ENST00000554803 HLXQ14774 488 aaPredicted RBP9.88□□□□□ -0.83
SRP54-205ENST00000554803 POU4F3Q15319 338 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 PCGF3Q3KNV8 242 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 TEX30Q5JUR7 227 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 LIN54Q6MZP7 749 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 RGS7BPQ6MZT1 257 aaPredicted RBP9.88□□□□□ -0.83
SRP54-205ENST00000554803 TMEM205Q6UW68 189 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 GSG1LQ6UXU4 331 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 Q6ZTK2 550 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 PRIMA1Q86XR5 153 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 MISPQ8IVT2 679 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 ZNF679Q8IYX0 411 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 STPG2Q8N412 459 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 C16orf52Q8NHV5 167 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 RNF128Q8TEB7 428 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 GPX8Q8TED1 209 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 NINJ1Q92982 152 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 TMEM106AQ96A25 262 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
SRP54-205ENST00000554803 RASD2Q96D21 266 aa9.88□□□□□ -0.83
SRP54-205ENST00000554803 Q96M85 177 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms