RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 LPAR2Q9HBW0 351 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 ISYNA1Q9NPH2 558 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 INPP5EQ9NRR6 644 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 TMEM38BQ9NVV0 291 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 CHCHD3Q9NX63 227 aaKnown RBP9.03□□□□□ -0.96
SHMT2-215ENST00000554656 TREM2Q9NZC2 230 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 ERGIC3Q9Y282 383 aa9.03□□□□□ -0.96
SHMT2-215ENST00000554656 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 A6NIZ1 184 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 B4DSR2 109 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 DHHO43323 396 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 RNF13O43567 381 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 TRMUO75648 421 aaKnown RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 RENP00797 406 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 FAM157BP0CG42 384 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 GAAP10253 952 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 MYL12AP19105 171 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 MAGEB1P43366 347 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 DAP3P51398 398 aaKnown RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 BLVRAP53004 296 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 TMBIM6P55061 237 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 RAP1BP61224 184 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 RPL27P61353 136 aaKnown RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 RPS23P62266 143 aaKnown RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 RAP1AP62834 184 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 ERVK-25P63136 954 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 ACTC1P68032 377 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 ACTA1P68133 377 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 KRR1Q13601 381 aaKnown RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 TMEM255AQ5JRV8 349 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 LIPNQ5VXI9 398 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 FOXB2Q5VYV0 432 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 PLBD1Q6P4A8 553 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 C1orf229Q6ZS94 237 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 BCDIN3DQ7Z5W3 292 aaKnown RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 JAZF1Q86VZ6 243 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 EGFL6Q8IUX8 553 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 NPEPL1Q8NDH3 523 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 OR52E2Q8NGJ4 325 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 RDH5Q92781 318 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 SLC25A44Q96H78 314 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 Q96M85 177 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 MYCBPQ99417 103 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 TEAD3Q99594 435 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 OR51B6Q9H340 312 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 MS4A5Q9H3V2 200 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 HIF1ANQ9NWT6 349 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 GRHPRQ9UBQ7 328 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 RSL24D1Q9UHA3 163 aaKnown RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 DUSP13Q9UII6 198 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 ZNF346Q9UL40 294 aaKnown RBP9.02□□□□□ -0.97
SHMT2-215ENST00000554656 ADAM18Q9Y3Q7 739 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 SPEF1Q9Y4P9 236 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 CEPT1Q9Y6K0 416 aa9.02□□□□□ -0.97
SHMT2-215ENST00000554656 IGLV3-9A0A075B6K5 115 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 TEX13CA0A0J9YWL9 993 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 A0A1W2PPW3 197 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 CCDC182A6NF36 153 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 CENPBD1B2RD01 187 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 J3QRE1 110 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 XKRYO14609 159 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 MYL12BO14950 172 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 NOL3O60936 208 aaKnown RBP9.01□□□□□ -0.97
SHMT2-215ENST00000554656 GLCEO94923 617 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 AVPP01185 164 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 TFP02787 698 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 MSMBP08118 114 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 QDPRP09417 244 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 OR8G3PP0DMU2 310 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 ZNF250P15622 560 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 MAP2K4P45985 399 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 GP2P55259 537 aaKnown RBP9.01□□□□□ -0.97
SHMT2-215ENST00000554656 MRPS11P82912 194 aaKnown RBP9.01□□□□□ -0.97
SHMT2-215ENST00000554656 GALK2Q01415 458 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 HIST3H3Q16695 136 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 IGFN1Q86VF2 1251 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 GLCCI1Q86VQ1 547 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 ANKRD13BQ86YJ7 626 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 CLVS1Q8IUQ0 354 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-215ENST00000554656 NANOGP1Q8N7R0 232 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 SLC30A7Q8NEW0 376 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 SDR9C7Q8NEX9 313 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 BBS1Q8NFJ9 593 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 OR2T4Q8NH00 348 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 OR4K13Q8NH42 304 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 OR52N1Q8NH53 320 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 ZNF519Q8TB69 540 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 FNDC8Q8TC99 324 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 RAB2BQ8WUD1 216 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 TMEM186Q96B77 213 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 TMIGD2Q96BF3 282 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 RASD2Q96D21 266 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 MRPL48Q96GC5 212 aaKnown RBP9.01□□□□□ -0.97
SHMT2-215ENST00000554656 COG8Q96MW5 612 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 MNTQ99583 582 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 MRPL13Q9BYD1 178 aaKnown RBP9.01□□□□□ -0.97
SHMT2-215ENST00000554656 METTL17Q9H7H0 456 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-215ENST00000554656 TAAR3PQ9P1P4 343 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 FBXL3Q9UKT7 428 aa9.01□□□□□ -0.97
SHMT2-215ENST00000554656 LSM2Q9Y333 95 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms