RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GRPRP30550 384 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ARRB2P32121 409 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 OTX1P32242 354 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RPL22P35268 128 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ARL4AP40617 200 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 GLP1RP43220 463 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 NR4A2P43354 598 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SRP9P49458 86 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TDGF1P3P51864 188 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 GFERP55789 205 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TAS2R50P59544 299 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 PLP1P60201 277 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 LSM3P62310 102 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ACVR1Q04771 509 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF616Q08AN1 781 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 MLLT11Q13015 90 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 MED21Q13503 144 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 GPR18Q14330 331 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF169Q14929 603 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RPE65Q16518 533 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 MST1LQ2TV78 715 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 FAM214AQ32MH5 1076 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SMIM21Q3B7S5 101 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ATAD3CQ5T2N8 411 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ATP1A1-AS1Q5TC04 95 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 FBXW9Q5XUX1 488 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 LEMD1Q68G75 181 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ELP2Q6IA86 826 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 CASP12Q6UXS9 341 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 MEPCEQ7L2J0 689 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ARPINQ7Z6K5 226 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RANBP3LQ86VV4 465 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SIDT2Q8NBJ9 832 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 POC1AQ8NBT0 407 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ACVR1CQ8NER5 493 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 OR4C5Q8NGB2 326 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 OR10G3Q8NGC4 313 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 OR52I1Q8NGK6 324 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 OR9Q1Q8NGQ5 310 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 FLVCR1-AS1Q8TAF5 88 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 CCDC107Q8WV48 283 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ISOC2Q96AB3 205 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SMIM12Q96EX1 92 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 NARS2Q96I59 477 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 HIST1H2AAQ96QV6 131 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 COPS8Q99627 209 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 NPLQ9BXD5 320 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 WWTR1Q9GZV5 400 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SLC25A51Q9H1U9 297 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 NT5DC2Q9H857 520 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM27Q9HBJ8 222 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SLC2A9Q9NRM0 540 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 AP5S1Q9NUS5 200 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 BABAM2Q9NXR7 383 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 KIAA1456Q9P272 454 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SLC23A2Q9UGH3 650 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 LAMP3Q9UQV4 416 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 B3GNT3Q9Y2A9 372 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RAP2CQ9Y3L5 183 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 NAV2Q8IVL1 2488 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 HECTD1Q9ULT8 2610 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 MED13Q9UHV7 2174 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 FLNCQ14315 2725 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 LOC400499M0QZD8 3231 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 A0A087X1B8 175 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TRBV5-4A0A0C4DH59 114 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 C3orf70A6NLC5 250 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 EVPLLA8MZ36 301 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TSTD3H0UI37 97 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 BTN3A3O00478 584 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 CCL22O00626 93 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 GAPDHSO14556 408 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RGS5O15539 181 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 PSTPIP1O43586 416 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 TYROBPO43914 113 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 PLIN3O60664 434 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SYNGR4O95473 234 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 CD74P04233 296 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 HLA-DQB2P05538 268 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 CHRM4P08173 479 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 UGT2B7P16662 529 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 BMP7P18075 431 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 MAGEA5P43359 124 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 RFX3P48380 749 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 GSK3BP49841 420 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 DLX5P56178 289 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 DNAJB13P59910 316 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 CDKL1Q00532 357 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 MVKQ03426 396 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 PIGFQ07326 219 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 BAMBIQ13145 260 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 BTN1A1Q13410 526 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 EXOSC2Q13868 293 aaKnown RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 CEACAM7Q14002 265 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SYPL1Q16563 259 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ACKR1Q16570 336 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF630Q2M218 657 aaPredicted RBP2.39□□□□□ -2.03
PRPF39-206ENST00000554429 SERTAD4-AS1Q5TG53 156 aa2.39□□□□□ -2.03
PRPF39-206ENST00000554429 BICRALQ6AI39 1079 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms