RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CHMP1BQ7LBR1 199 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 TMPRSS9Q7Z410 1059 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 DND1Q8IYX4 353 aaKnown RBP5.28□□□□□ -1.56
VPS33B-203ENST00000554264 SPAG16Q8N0X2 631 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 SVBPQ8N300 66 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 TMEM229BQ8NBD8 167 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 PXT1Q8NFP0 134 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 OR52E2Q8NGJ4 325 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 LCN9Q8WX39 176 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 RERGQ96A58 199 aaPredicted RBP5.28□□□□□ -1.56
VPS33B-203ENST00000554264 SLC25A38Q96DW6 304 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 MARS2Q96GW9 593 aaKnown RBP5.28□□□□□ -1.56
VPS33B-203ENST00000554264 KLHL15Q96M94 604 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 PRRT1Q99946 306 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 SEC22CQ9BRL7 303 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 GINS4Q9BRT9 223 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 ZPBPQ9BS86 351 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 AICDAQ9GZX7 198 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 MFFQ9GZY8 342 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 ARL6Q9H0F7 186 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 OR10A4Q9H209 315 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 KLHL31Q9H511 634 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 MCCC2Q9HCC0 563 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 APMAPQ9HDC9 416 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 NOX4Q9NPH5 578 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 EXOSC3Q9NQT5 275 aaKnown RBP5.28□□□□□ -1.56
VPS33B-203ENST00000554264 SLC39A1Q9NY26 324 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 NKIRAS2Q9NYR9 191 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 CKLFQ9UBR5 152 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 SLC23A2Q9UGH3 650 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 ATPIF1Q9UII2 106 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 SLC45A2Q9UMX9 530 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 PLCL2Q9UPR0 1127 aa5.28□□□□□ -1.56
VPS33B-203ENST00000554264 MRPS33Q9Y291 106 aaKnown RBP5.28□□□□□ -1.56
VPS33B-203ENST00000554264 AK6Q9Y3D8 172 aaKnown RBP5.28□□□□□ -1.56
VPS33B-203ENST00000554264 KLF2Q9Y5W3 355 aaPredicted RBP5.28□□□□□ -1.56
VPS33B-203ENST00000554264 SPTAN1Q13813 2472 aaKnown RBP5.28□□□□□ -1.56
VPS33B-203ENST00000554264 USP9YO00507 2555 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-203ENST00000554264 A0A087WUJ7 227 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 TRBV5-7A0A0A0MS05 114 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 IGHV5-10-1A0A0J9YXX1 117 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 CIB4A0PJX0 185 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 SLC22A23A1A5C7 686 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 GGT3PA6NGU5 568 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 PRSS29PA6NIE9 313 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 GLOD5A6NK44 160 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 B4E171 279 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 DIRC3C9JPN6 131 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 ATP6V1G2-DDX39BF2Z307 99 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 BLOC1S5-TXNDC5H3BN57 136 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 MKRN2OSH3BPM6 223 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 H7C2Y5 167 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 F2RL2O00254 374 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 SLC17A2O00624 439 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 MAGEB4O15481 346 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-203ENST00000554264 ARPC5O15511 151 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 BCL2L11O43521 198 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 GMDSO60547 372 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 CDC123O75794 336 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-203ENST00000554264 RENP00797 406 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 CD2P06729 351 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 CD14P08571 375 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 MRPL3P09001 348 aaKnown RBP5.27□□□□□ -1.57
VPS33B-203ENST00000554264 ANKRD34CP0C6C1 535 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 C8orf89P0DMQ9 161 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 SPI1P17947 270 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 CXCL2P19875 107 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 TCN2P20062 427 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 CDK2P24941 298 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 AK4P27144 223 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-203ENST00000554264 MPGP29372 298 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 PRSS3P35030 304 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 RPL4P36578 427 aaKnown RBP5.27□□□□□ -1.57
VPS33B-203ENST00000554264 TSPAN7P41732 249 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 RAD52P43351 418 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 HOXA1P49639 335 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-203ENST00000554264 STARP49675 285 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 RIPPLY3P57055 190 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 TAS2R31P59538 309 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 CTAG1AP78358 180 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 MAT1AQ00266 395 aaKnown RBP5.27□□□□□ -1.57
VPS33B-203ENST00000554264 NAAAQ02083 359 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 LTBQ06643 244 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 SERTAD2Q14140 314 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 DEFB109BQ30KR1 87 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 PCGF3Q3KNV8 242 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 ZNF684Q5T5D7 378 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 FAM27D1Q5T7N8 215 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 PXDC1Q5TGL8 231 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 GLT8D1Q68CQ7 371 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 AWAT2Q6E213 333 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 SFRP4Q6FHJ7 346 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-203ENST00000554264 EIF5AL1Q6IS14 154 aaKnown RBP5.27□□□□□ -1.57
VPS33B-203ENST00000554264 C11orf88Q6PI97 169 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 TMEM205Q6UW68 189 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 C5orf46Q6UWT4 87 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 B3GLCTQ6Y288 498 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 Q6ZTK2 550 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 FCRLAQ7L513 359 aa5.27□□□□□ -1.57
VPS33B-203ENST00000554264 SLC36A1Q7Z2H8 476 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms