RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 CLPTM1LQ96KA5 538 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 COG8Q96MW5 612 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 ZIM3Q96PE6 472 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 BCL2L10Q9HD36 194 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 THUMPD1Q9NXG2 353 aaKnown RBP5.57□□□□□ -1.52
ATXN3-224ENST00000554040 RPUSD1Q9UJJ7 312 aaKnown RBP5.57□□□□□ -1.52
ATXN3-224ENST00000554040 IGKV1D-43A0A0B4J1Z2 117 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 A0A1B0GVI7 797 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 F5H5P2 479 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 H3BUX3 64 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 NPFFO15130 113 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 RIPK2O43353 540 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 ADAM20O43506 726 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 NDUFA2O43678 99 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 OR10H3O60404 316 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 TPST2O60704 377 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 ZFPL1O95159 310 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 CH25HO95992 272 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 PAHP00439 452 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 HIST1H2ABP04908 130 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 CST2P09228 141 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 COX5BP10606 129 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 ACADSP16219 412 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 ZNF26P17031 533 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-224ENST00000554040 LAP3P28838 519 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 HOXD3P31249 432 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-224ENST00000554040 RPL4P36578 427 aaKnown RBP5.56□□□□□ -1.52
ATXN3-224ENST00000554040 CDH12P55289 794 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 SLC35A2P78381 396 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 LRRC74AQ0VAA2 488 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 ZNF74Q16587 644 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 DMRTC1Q5HYR2 192 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 CLEC12AQ5QGZ9 265 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 OR2T2Q6IF00 324 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 DHRS4L2Q6PKH6 230 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 TRMT10CQ7L0Y3 403 aaKnown RBP5.56□□□□□ -1.52
ATXN3-224ENST00000554040 HIST3H2AQ7L7L0 130 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 COMTD1Q86VU5 262 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 BEND2Q8NDZ0 799 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 NOXO1Q8NFA2 376 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 NSMAFQ92636 917 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 HIST1H2ACQ93077 130 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 NMD3Q96D46 503 aaKnown RBP5.56□□□□□ -1.52
ATXN3-224ENST00000554040 ZNF582Q96NG8 517 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-224ENST00000554040 OR52E6Q96RD3 313 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 SSX3Q99909 188 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 FAM234AQ9H0X4 552 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 PCDHAC1Q9H158 963 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 MMADHCQ9H3L0 296 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-224ENST00000554040 SMURF2Q9HAU4 748 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 TPT1P8Q9HAU6 139 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 RAB18Q9NP72 206 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 NANSQ9NR45 359 aa5.56□□□□□ -1.52
ATXN3-224ENST00000554040 NKX1-2Q9UD57 310 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-224ENST00000554040 NDRG4Q9ULP0 352 aaKnown RBP5.56□□□□□ -1.52
ATXN3-224ENST00000554040 A0A1W2PRD5 423 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 A0A1W2PRF3 423 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 A0A1W2PRG6 482 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 A0A1W2PRM7 423 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 UBE2QL1A1L167 161 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 MEIOCA2RUB1 952 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 MCIDASD6RGH6 385 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 LGALS8O00214 317 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 RFXANKO14593 260 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 MLNRO43193 412 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 TPST1O60507 370 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 FMO6PO60774 539 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 FCN3O75636 299 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 ASAH2BP0C7U1 165 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 ETS2P15036 469 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 IL12AP29459 219 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 NME5P56597 212 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 NCALDP61601 193 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 UFM1P61960 85 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 HOXA4Q00056 320 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-224ENST00000554040 PRB3Q04118 309 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-224ENST00000554040 MAB21L1Q13394 359 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 LY6EQ16553 131 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 C21orf62-AS1Q17RA5 79 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 SFRP4Q6FHJ7 346 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-224ENST00000554040 SLC25A47Q6Q0C1 308 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 FBXW12Q6X9E4 464 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 HDDC2Q7Z4H3 204 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 RANBP3LQ86VV4 465 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-224ENST00000554040 SLC30A8Q8IWU4 369 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 Q8N2B8 174 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 C10orf111Q8N326 155 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 LY6G5BQ8NDX9 201 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 OR11L1Q8NGX0 322 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 BBS10Q8TAM1 723 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 SLC7A13Q8TCU3 470 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 ASB10Q8WXI3 467 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 C16orf92Q96LL3 132 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 PPP1R36Q96LQ0 422 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 NUF2Q9BZD4 464 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 NPFFR1Q9GZQ6 430 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 MEAF6Q9HAF1 191 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 SLCO1B3Q9NPD5 702 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 SIRT7Q9NRC8 400 aa5.55□□□□□ -1.52
ATXN3-224ENST00000554040 C20orf141Q9NUB4 165 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms