RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 C8orf46Q8TAG6 207 aa7.38□□□□□ -1.23
PRKCH-208ENST00000553846 FNDC8Q8TC99 324 aa7.38□□□□□ -1.23
PRKCH-208ENST00000553846 PIFOQ8TCI5 191 aa7.38□□□□□ -1.23
PRKCH-208ENST00000553846 APOBEC3DQ96AK3 386 aaPredicted RBP7.38□□□□□ -1.23
PRKCH-208ENST00000553846 SGTBQ96EQ0 304 aa7.38□□□□□ -1.23
PRKCH-208ENST00000553846 CITED2Q99967 270 aaPredicted RBP7.38□□□□□ -1.23
PRKCH-208ENST00000553846 WNT10AQ9GZT5 417 aa7.38□□□□□ -1.23
PRKCH-208ENST00000553846 MMADHCQ9H3L0 296 aaPredicted RBP7.38□□□□□ -1.23
PRKCH-208ENST00000553846 CNTD2Q9H8S5 307 aa7.38□□□□□ -1.23
PRKCH-208ENST00000553846 SSU72Q9NP77 194 aaKnown RBP7.38□□□□□ -1.23
PRKCH-208ENST00000553846 SIRT7Q9NRC8 400 aa7.38□□□□□ -1.23
PRKCH-208ENST00000553846 RNF7Q9UBF6 113 aa7.38□□□□□ -1.23
PRKCH-208ENST00000553846 FAM96BQ9Y3D0 163 aa7.38□□□□□ -1.23
PRKCH-208ENST00000553846 ELOVL7A1L3X0 281 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 ANKRD61A6NGH8 418 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 OOEPA6NGQ2 149 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 TRPC5OSA6NMA1 111 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 H3BUX3 64 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.37□□□□□ -1.23
PRKCH-208ENST00000553846 H7C1C5 153 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 M0QX08 132 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 RER1O15258 196 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 NDUFA2O43678 99 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 FBXO24O75426 580 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 CTLA4P16410 223 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 ZNF26P17031 533 aaPredicted RBP7.37□□□□□ -1.23
PRKCH-208ENST00000553846 AMY2BP19961 511 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 PPIBP23284 216 aaKnown RBP7.37□□□□□ -1.23
PRKCH-208ENST00000553846 LCN6P62502 163 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 GUCA2AQ02747 115 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 STX3Q13277 289 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 NSUN5P1Q3KNT7 163 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 ALG10Q5BKT4 473 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 TNFAIP8L3Q5GJ75 292 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 C1orf94Q6P1W5 598 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 BLOC1S3Q6QNY0 202 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 PLPP7Q8NBV4 271 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 OR4F17Q8NGA8 305 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 OR11L1Q8NGX0 322 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 OR2T6Q8NHC8 308 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 R3HDM4Q96D70 268 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 RBP7Q96R05 134 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 OR4F4Q96R69 305 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 OCSTAMPQ9BR26 566 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 TMEM109Q9BVC6 243 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 ROPN1BQ9BZX4 212 aaPredicted RBP7.37□□□□□ -1.23
PRKCH-208ENST00000553846 WDR76Q9H967 626 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 ROPN1Q9HAT0 212 aaPredicted RBP7.37□□□□□ -1.23
PRKCH-208ENST00000553846 UFSP2Q9NUQ7 469 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 TMEM100Q9NV29 134 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 SLC13A4Q9UKG4 626 aa7.37□□□□□ -1.23
PRKCH-208ENST00000553846 CAB39Q9Y376 341 aaPredicted RBP7.37□□□□□ -1.23
PRKCH-208ENST00000553846 TEX13CA0A0J9YWL9 993 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 GYPAP02724 150 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 VSIG10L2P0DP72 767 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 IRF2P14316 349 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 RPL4P36578 427 aaKnown RBP7.36□□□□□ -1.23
PRKCH-208ENST00000553846 UBE2E1P51965 193 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 LSM6P62312 80 aaKnown RBP7.36□□□□□ -1.23
PRKCH-208ENST00000553846 EMX1Q04741 257 aaPredicted RBP7.36□□□□□ -1.23
PRKCH-208ENST00000553846 ACSM1Q08AH1 577 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 SELPLGQ14242 412 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 GK2Q14410 553 aaPredicted RBP7.36□□□□□ -1.23
PRKCH-208ENST00000553846 HABP2Q14520 560 aaPredicted RBP7.36□□□□□ -1.23
PRKCH-208ENST00000553846 KCNJ8Q15842 424 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 KCNMB1Q16558 191 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 AANATQ16613 207 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 MESTQ5EB52 335 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 NKAPLQ5M9Q1 402 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 BEND6Q5SZJ8 279 aaPredicted RBP7.36□□□□□ -1.23
PRKCH-208ENST00000553846 PGBD2Q6P3X8 592 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 FAM122BQ7Z309 247 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 TMEM239Q8WW34 195 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 COQ7Q99807 217 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 MEGF9Q9H1U4 602 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 TRIM36Q9NQ86 728 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 LHFPL6Q9Y693 200 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 FRAS1Q86XX4 4008 aa7.36□□□□□ -1.23
PRKCH-208ENST00000553846 TRAV38-1A0A0B4J264 116 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 A0A1W2PRD5 423 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 A0A1W2PRF3 423 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 A0A1W2PRM7 423 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 A6NIZ1 184 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 C3orf84H3BNL1 204 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 IMPA2O14732 288 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 UBDO15205 165 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 POLR3GO15318 223 aaPredicted RBP7.35□□□□□ -1.23
PRKCH-208ENST00000553846 OR5F1O95221 314 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 MSX2P35548 267 aaPredicted RBP7.35□□□□□ -1.23
PRKCH-208ENST00000553846 GZMMP51124 257 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 WDR4P57081 412 aaKnown RBP7.35□□□□□ -1.23
PRKCH-208ENST00000553846 CTXN1P60606 82 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 RAP1BP61224 184 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 RAP1AP62834 184 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 CD69Q07108 199 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 ZBTB37Q5TC79 503 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 ZNF826PQ6ZT77 177 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 C11orf53Q8IXP5 236 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 C11orf65Q8NCR3 313 aa7.35□□□□□ -1.23
PRKCH-208ENST00000553846 OR5L1Q8NGL2 311 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms