RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 PXT1Q8NFP0 134 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 OR4K2Q8NGD2 314 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 OR11L1Q8NGX0 322 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 RNASE11Q8TAA1 199 aaKnown RBP2.99□□□□□ -1.93
TDP1-207ENST00000553617 RNASEH2CQ8TDP1 164 aaKnown RBP2.99□□□□□ -1.93
TDP1-207ENST00000553617 VN1R17PQ8TDU5 208 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 NUS1Q96E22 293 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 SGTBQ96EQ0 304 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 NOL4LQ96MY1 436 aaPredicted RBP2.99□□□□□ -1.93
TDP1-207ENST00000553617 ZNF599Q96NL3 588 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 KCNA7Q96RP8 456 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 PSMB7Q99436 277 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 STACQ99469 402 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 HOPXQ9BPY8 73 aaPredicted RBP2.99□□□□□ -1.93
TDP1-207ENST00000553617 TMEM109Q9BVC6 243 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 DDA1Q9BW61 102 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 RAB34Q9BZG1 259 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 UCK2Q9BZX2 261 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 ELOVL4Q9GZR5 314 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 ZSCAN16Q9H4T2 348 aaPredicted RBP2.99□□□□□ -1.93
TDP1-207ENST00000553617 ZNF430Q9H8G1 570 aaPredicted RBP2.99□□□□□ -1.93
TDP1-207ENST00000553617 NMRAL1Q9HBL8 299 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 DDX19AQ9NUU7 478 aaKnown RBP2.99□□□□□ -1.93
TDP1-207ENST00000553617 NLE1Q9NVX2 485 aaPredicted RBP2.99□□□□□ -1.93
TDP1-207ENST00000553617 ZNF581Q9P0T4 197 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 PAK5Q9P286 719 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 SLC22A7Q9Y694 548 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 RFX7Q2KHR2 1363 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 CCNB3Q8WWL7 1395 aa2.99□□□□□ -1.93
TDP1-207ENST00000553617 TRBV9A0A0B4J1U6 114 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 A0A0J9YWU9 116 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 A0A1B0GUS0 222 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 EFCAB7A8K855 629 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 HIDE1A8MVS5 230 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 LINC00587B1AMM8 73 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 F8W036 122 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 SIRPB1O00241 398 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 DCTN6O00399 190 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 TNFSF11O14788 317 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 TCAPO15273 167 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 RGS16O15492 202 aaPredicted RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 NUPL2O15504 423 aaKnown RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 FADS1O60427 444 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 CST8O60676 142 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 PLEKHA8P1O95397 391 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 IGHV3-13P01766 116 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 NBEAP1P0C6P0 100 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 UCHL3P15374 230 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 HOXB6P17509 224 aaKnown RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 IL2RGP31785 369 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 GSSP48637 474 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 CX3CR1P49238 355 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 PRLHRP49683 370 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 IDH3GP51553 393 aaPredicted RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 OR4D2P58180 307 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 UBE2MP61081 183 aaKnown RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 FAM3AP98173 230 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 TLE4Q04727 773 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 C2orf80Q0P641 193 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 EIF4EBP2Q13542 120 aaPredicted RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 KRR1Q13601 381 aaKnown RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 SPA17Q15506 151 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 TGIF1Q15583 401 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 ZNF77Q15935 545 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 GABRA6Q16445 453 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 C14orf177Q52M58 125 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 PDZD11Q5EBL8 140 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 DMRTC1Q5HYR2 192 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 RBM48Q5RL73 367 aaKnown RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 TIMM23BQ5SRD1 257 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 OGFRL1Q5TC84 451 aaPredicted RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 FAHD1Q6P587 224 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 NPSR1Q6W5P4 371 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 ZNF836Q6ZNA1 936 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 OR2W3Q7Z3T1 314 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 TMEM25Q86YD3 366 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 WDFY1Q8IWB7 410 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 NRMQ8IXM6 262 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 ATP6V0D2Q8N8Y2 350 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 OR4F6Q8NGB9 312 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 OR56A4Q8NGH8 313 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 OR5AK3PQ8NH89 298 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 BAALCQ8WXS3 180 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 RPEQ96AT9 228 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 CREB3L1Q96BA8 519 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 ANKRD9Q96BM1 317 aaPredicted RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 YIPF6Q96EC8 236 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 WDR34Q96EX3 536 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 FAM210BQ96KR6 192 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 RILPQ96NA2 401 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 TBX15Q96SF7 602 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 VGLL1Q99990 258 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 NMUR2Q9GZQ4 415 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 NAA50Q9GZZ1 169 aaKnown RBP2.98□□□□□ -1.93
TDP1-207ENST00000553617 NIPAL2Q9H841 368 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 GIN1Q9NXP7 522 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 SMPXQ9UHP9 88 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 KLK13Q9UKR3 277 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 TFR2Q9UP52 801 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 NDUFAF1Q9Y375 327 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms