RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 NAT9Q9BTE0 207 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 RIOK2Q9BVS4 552 aaKnown RBP3.7□□□□□ -1.82
PCNX1-205ENST00000553508 RSPO3Q9BXY4 272 aaPredicted RBP3.7□□□□□ -1.82
PCNX1-205ENST00000553508 OR11A1Q9GZK7 315 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 UCK1Q9HA47 277 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 NT5MQ9NPB1 228 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 GPATCH2LQ9NWQ4 482 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 RABL2BQ9UNT1 228 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 PPIL1Q9Y3C6 166 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 BZW2Q9Y6E2 419 aaKnown RBP3.7□□□□□ -1.82
PCNX1-205ENST00000553508 CLCA3PQ9Y6N3 262 aa3.7□□□□□ -1.82
PCNX1-205ENST00000553508 MN1Q10571 1320 aaPredicted RBP3.7□□□□□ -1.82
PCNX1-205ENST00000553508 SDK2Q58EX2 2172 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 IGKV1D-8A0A087WSZ0 117 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 A0A0J9YYE9 177 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 C1orf232A0A0U1RR37 186 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 G3V4G9 280 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 K7EPI3 171 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 CASC3O15234 703 aaKnown RBP3.69□□□□□ -1.82
PCNX1-205ENST00000553508 KLHL41O60662 606 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 SCGB2A1O75556 95 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 TRBC1P01850 177 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 KRT7P08729 469 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 PGCP20142 388 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 FGF9P31371 208 aaPredicted RBP3.69□□□□□ -1.82
PCNX1-205ENST00000553508 STC1P52823 247 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 RPS15P62841 145 aaKnown RBP3.69□□□□□ -1.82
PCNX1-205ENST00000553508 SRSF6Q13247 344 aaKnown RBP3.69□□□□□ -1.82
PCNX1-205ENST00000553508 PDK2Q15119 407 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.69□□□□□ -1.82
PCNX1-205ENST00000553508 KCTD16Q68DU8 428 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 ZNF571Q7Z3V5 609 aaPredicted RBP3.69□□□□□ -1.82
PCNX1-205ENST00000553508 ABHD12BQ7Z5M8 362 aaPredicted RBP3.69□□□□□ -1.82
PCNX1-205ENST00000553508 TBC1D21Q8IYX1 336 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 PATE1Q8WXA2 126 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 CXorf40BQ96DE9 158 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 TTC25Q96NG3 672 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 LYSMD1Q96S90 227 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 ZSCAN5AQ9BUG6 496 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 RHBGQ9H310 441 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 FANCEQ9HB96 536 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 CD84Q9UIB8 345 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 CCDC168Q8NDH2 2452 aa3.69□□□□□ -1.82
PCNX1-205ENST00000553508 HIVEP3Q5T1R4 2406 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 A0A0G2JLM5 398 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 E9PBE3 544 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 KMOO15229 486 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 SMPD2O60906 423 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 PEX11AO75192 247 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 SLC25A14O95258 325 aaPredicted RBP3.68□□□□□ -1.82
PCNX1-205ENST00000553508 SOD1P00441 154 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 TPM3P06753 285 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 KLK3P07288 261 aaPredicted RBP3.68□□□□□ -1.82
PCNX1-205ENST00000553508 TPSB2P20231 275 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 HPCAL1P37235 193 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 ACAA2P42765 397 aaKnown RBP3.68□□□□□ -1.82
PCNX1-205ENST00000553508 CAPZBP47756 277 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 SPINT3P49223 89 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 KPNA2P52292 529 aaKnown RBP3.68□□□□□ -1.82
PCNX1-205ENST00000553508 MAXP61244 160 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 OGDHQ02218 1023 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 TPSAB1Q15661 275 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 CHRNA6Q15825 494 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 PIGGQ5H8A4 983 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 CCDC183Q5T5S1 534 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 C6orf120Q7Z4R8 191 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 FTMTQ8N4E7 242 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 TRAM1L1Q8N609 369 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 SLC22A8Q8TCC7 542 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 PIH1D2Q8WWB5 315 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 LRRC45Q96CN5 670 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 COX14Q96I36 57 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 ZNF514Q96K75 400 aaPredicted RBP3.68□□□□□ -1.82
PCNX1-205ENST00000553508 C9orf72Q96LT7 481 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 TGM7Q96PF1 710 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 PEBP4Q96S96 227 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 ZNF670Q9BS34 389 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 TIMM29Q9BSF4 260 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 SELENOIQ9C0D9 397 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 OR2AG1Q9H205 316 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 HAUS4Q9H6D7 363 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 CALHM2Q9HA72 323 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 EML4Q9HC35 981 aaKnown RBP3.68□□□□□ -1.82
PCNX1-205ENST00000553508 RBM22Q9NW64 420 aaKnown RBP eCLIP3.68□□□□□ -1.826e-9■■■■■ 47.5
PCNX1-205ENST00000553508 GSTK1Q9Y2Q3 226 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 ITPR3Q14573 2671 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 C2CD3Q4AC94 2353 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 PCM1Q15154 2024 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 ICE1Q9Y2F5 2266 aa3.68□□□□□ -1.82
PCNX1-205ENST00000553508 TLCD2A6NGC4 264 aa3.67□□□□□ -1.82
PCNX1-205ENST00000553508 MFSD11O43934 449 aa3.67□□□□□ -1.82
PCNX1-205ENST00000553508 DPM1O60762 260 aa3.67□□□□□ -1.82
PCNX1-205ENST00000553508 CDK14O94921 469 aa3.67□□□□□ -1.82
PCNX1-205ENST00000553508 IFNB1P01574 187 aa3.67□□□□□ -1.82
PCNX1-205ENST00000553508 RALBP11234 206 aa3.67□□□□□ -1.82
PCNX1-205ENST00000553508 ZNF7P17097 686 aaPredicted RBP3.67□□□□□ -1.82
PCNX1-205ENST00000553508 NELFEP18615 380 aaKnown RBP3.67□□□□□ -1.82
PCNX1-205ENST00000553508 TNNI3P19429 210 aa3.67□□□□□ -1.82
PCNX1-205ENST00000553508 TBXA2RP21731 343 aa3.67□□□□□ -1.82
PCNX1-205ENST00000553508 CXCR2P25025 360 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms