RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ABHD12BQ7Z5M8 362 aaPredicted RBP17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 LRRC28Q86X40 367 aaPredicted RBP17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 GCNT2Q8N0V5 402 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 WNT2BQ93097 391 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 GPR84Q9NQS5 396 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 CYSLTR2Q9NS75 346 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 ANXA2P2A6NMY6 339 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 TTLL8A6PVC2 850 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 EIF4EP06730 217 aaKnown RBP17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 CFPP27918 469 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 SLC6A9P48067 706 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 PSMD7P51665 324 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 FAM214BQ7L5A3 538 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 C9orf106Q8NAJ2 232 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 SNRNP27Q8WVK2 155 aaKnown RBP17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 FGGYQ96C11 551 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 ADAT3Q96EY9 351 aaPredicted RBP17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 CCDC32Q9BV29 185 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 PPP1R3EQ9H7J1 279 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 ABCB10Q9NRK6 738 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 CKLFQ9UBR5 152 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 ADAM30Q9UKF2 790 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 SPATA2Q9UM82 520 aa17.09■□□□□ 0.33
RBFOX1-215ENST00000553186 MED12LQ86YW9 2145 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 A0A1B0GVI7 797 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 SLC34A2O95436 690 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 IL18BPO95998 194 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 APOC1P02654 83 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 ADRB1P08588 477 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 UCNP55089 124 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 HGFACQ04756 655 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 ZNF181Q2M3W8 571 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 SFRP5Q5T4F7 317 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 STEAP3Q658P3 488 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 LYSMD2Q8IV50 215 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 OR1J2Q8NGS2 313 aa17.08■□□□□ 0.33
RBFOX1-215ENST00000553186 ITGA5P08648 1049 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 CD37P11049 281 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 MPGP29372 298 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 CLDN12P56749 244 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 XKRXQ6PP77 449 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 METAP1DQ6UB28 335 aaPredicted RBP17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 DRAM2Q6UX65 266 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 TFAP2EQ6VUC0 442 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 DRAXINQ8NBI3 349 aaPredicted RBP17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 OR51A2Q8NGJ7 313 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 LGALS14Q8TCE9 139 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 PGAM5Q96HS1 289 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 LYZL4Q96KX0 146 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 LIN7BQ9HAP6 207 aa17.08■□□□□ 0.32
RBFOX1-215ENST00000553186 A0A0U1RQV5 110 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 ZNF503-AS2A6NEH8 195 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 AZGP1P25311 298 aaKnown RBP17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 HTR5AP47898 357 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 MADCAM1Q13477 382 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 P2RY14Q15391 338 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 SLC36A2Q495M3 483 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 PABPC1L2AQ5JQF8 200 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 NSUN5P2Q63ZY6 315 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 ZNF324BQ6AW86 544 aaPredicted RBP17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 Q8NA96 180 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 PLPP7Q8NBV4 271 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 CPEB3Q8NE35 698 aaKnown RBP17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 ZNF671Q8TAW3 534 aa17.07■□□□□ 0.32
RBFOX1-215ENST00000553186 A6NIN4 97 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 FAM25AB3EWG3 89 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 FAM25CB3EWG5 89 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 FAM25GB3EWG6 89 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 ZNF12P17014 697 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 KIR2DL2P43627 348 aaPredicted RBP17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 RGS21Q2M5E4 152 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 SNAI3Q3KNW1 292 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 ZNF585AQ6P3V2 769 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 SERPINA12Q8IW75 414 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 ZNF71Q9NQZ8 489 aaPredicted RBP17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 C14orf119Q9NWQ9 140 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 EXTL2Q9UBQ6 330 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 HLA-HP01893 362 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 APOA1P02647 267 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 TPTEP56180 551 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 BAK1Q16611 211 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 ZNF529Q6P280 563 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 DOK3Q7L591 496 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 COMMD2Q86X83 199 aa17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 FAM71F1Q96KD3 344 aaPredicted RBP17.06■□□□□ 0.32
RBFOX1-215ENST00000553186 PTBP1P26599 531 aaKnown RBP eCLIP17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 DDOSTP39656 456 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 RIN1Q13671 783 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 GFOD2Q3B7J2 385 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 KRTCAP3Q53RY4 240 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 FAM166AQ6J272 317 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 FAM180AQ6UWF9 173 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 Q6ZSR3 168 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 SEM1Q6ZVN7 128 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 GDPD1Q8N9F7 314 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 OR4M1Q8NGD0 313 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 CMTM3Q96MX0 182 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 MRI1Q9BV20 369 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 NOX3Q9HBY0 568 aa17.05■□□□□ 0.32
RBFOX1-215ENST00000553186 OR5V1Q9UGF6 321 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms