RNA–Protein interactions for RNA: ENST00000552054.1

TBX3-204, Transcript of T-box 3, human

TSL 2

Gene TBX3, Length 1,814 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TBX3-204	ENST00000552054	FGF2	P09038	288 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	NUP62	P37198	522 aa	Predicted RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	PMPCA	Q10713	525 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	RTP5	Q14D33	572 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	NSDHL	Q15738	373 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	CLVS2	Q5SYC1	327 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ALKAL2	Q6UX46	152 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	UNQ6494/PRO21346	Q6UXR6	183 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	MDGA2	Q7Z553	956 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	GALNT16	Q8N428	558 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	OR5M9	Q8NGP3	310 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	OR13C3	Q8NGS6	347 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	OR8S1	Q8NH09	359 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	OR1L3	Q8NH93	324 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ST7L	Q8TDW4	575 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	DUSP19	Q8WTR2	217 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ASB10	Q8WXI3	467 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	DNAJA3	Q96EY1	480 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	LINC00052	Q96N35	136 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	STRADB	Q9C0K7	418 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ASCL3	Q9NQ33	180 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	SLC2A8	Q9NY64	477 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	DHCR7	Q9UBM7	475 aa	Known RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	COA3	Q9Y2R0	106 aa	Predicted RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	TRAV14DV4	A0A0A6YYC5	116 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	UBC	P0CG48	685 aa	Known RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	AGTR1	P30556	359 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	DNASE1L1	P49184	302 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	MELK	Q14680	651 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ZMYND11	Q15326	602 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	TMEM244	Q5VVB8	128 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	C11orf88	Q6PI97	169 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	C16orf54	Q6UWD8	224 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ZNF627	Q7L945	461 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	OR51A2	Q8NGJ7	313 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	COQ8A	Q8NI60	647 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	TMEM234	Q8WY98	164 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	OR11A1	Q9GZK7	315 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	MFF	Q9GZY8	342 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ZNF768	Q9H5H4	540 aa	Known RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ZNF304	Q9HCX3	659 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	FOXJ2	Q9P0K8	574 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	SEMA5B	Q9P283	1151 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	OR52A1	Q9UKL2	312 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	EMC9	Q9Y3B6	208 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ACACB	O00763	2458 aa		13.64	□□□□□ -0.23
TBX3-204	ENST00000552054	ZNF736	B4DX44	427 aa	Predicted RBP	13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	C9orf172	C9J069	976 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	CYB5A	P00167	134 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	AMY2A	P04746	511 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	UBB	P0CG47	229 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	FOLR1	P15328	257 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	NAGA	P17050	411 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	DAP3	P51398	398 aa	Known RBP	13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	RPS27A	P62979	156 aa	Known RBP	13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	UBA52	P62987	128 aa	Known RBP	13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	SORD	Q00796	357 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	MEF2D	Q14814	521 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	RAB12	Q6IQ22	244 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	D2HGDH	Q8N465	521 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	AGBL5	Q8NDL9	886 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	OR5M8	Q8NGP6	311 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	OR1S1	Q8NH92	325 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	ST8SIA1	Q92185	356 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	AQP3	Q92482	292 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	CNTNAP3B	Q96NU0	1288 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	CMKLR1	Q99788	373 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	CNTNAP3	Q9BZ76	1288 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	VN1R1	Q9GZP7	353 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	SHARPIN	Q9H0F6	387 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	CFAP47	Q6ZTR5	3102 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	FREM3	P0C091	2139 aa		13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	TPR	P12270	2363 aa	Known RBP	13.63	□□□□□ -0.23
TBX3-204	ENST00000552054	APC2	O95996	2303 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	MS4A18	H0YCH9	400 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	TLX3	O43711	291 aa	Predicted RBP	13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	JMJD7	P0C870	316 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	ZNF823	P16415	610 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	MGMT	P16455	207 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	FGL1	Q08830	312 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	ZNF345	Q14585	488 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	MS4A18	Q3C1V0	323 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	VWA2	Q5GFL6	755 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	PDZD9	Q8IXQ8	264 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	ZNF248	Q8NDW4	579 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	BVES	Q8NE79	360 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	OR13C8	Q8NGS7	320 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	MFSD8	Q8NHS3	518 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	KCNK17	Q96T54	332 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	MAP1B	P46821	2468 aa	Known RBP	13.62	□□□□□ -0.23
TBX3-204	ENST00000552054		A0A0D9SG52	128 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	ANKUB1	A6NFN9	424 aa		13.62	□□□□□ -0.23
TBX3-204	ENST00000552054	TMEM200C	A6NKL6	621 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms