RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 PRAMEF6Q5VXH4 476 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 DNM1P34Q6PK57 102 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 TMPRSS11FQ6ZWK6 438 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 ADCK1Q86TW2 530 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 ZSCAN4Q8NAM6 433 aaPredicted RBP11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 SPRYD4Q8WW59 207 aaPredicted RBP11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 SIKE1Q9BRV8 207 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 SLC22A4Q9H015 551 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 TMEM5Q9Y2B1 443 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 FAM96BQ9Y3D0 163 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 A0A087WUU8 490 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 A0A0U1RQK1 487 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 C5orf63A6NC05 138 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 BTBD17A6NE02 478 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 FXYD1O00168 92 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 LGALS8O00214 317 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 ADAM20O43506 726 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 NDUFB2O95178 105 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 CSF1P09603 554 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 CENPAP49450 140 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 HIST1H3AP68431 136 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 GK2Q14410 553 aaPredicted RBP11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 OR8G1Q15617 311 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 OR8B8Q15620 311 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 C11orf91Q3C1V1 193 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 HIST2H3PS2Q5TEC6 136 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 METTL21CQ5VZV1 264 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 SFRP4Q6FHJ7 346 aaPredicted RBP11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 DHRS7BQ6IAN0 325 aaPredicted RBP11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 COLCA1Q6ZS62 124 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 HIST2H3AQ71DI3 136 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 BOLLQ8N9W6 283 aaKnown RBP11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 OR2T12Q8NG77 320 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 NUAK2Q9H093 628 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 SIRPDQ9H106 197 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 C16orf95Q9H693 158 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 MRGBPQ9NV56 204 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 CTSZQ9UBR2 303 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 RPS6KA6Q9UK32 745 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 CAB39Q9Y376 341 aaPredicted RBP11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 LHFPL6Q9Y693 200 aa11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 TET2Q6N021 2002 aaPredicted RBP11.74□□□□□ -0.53
CHMP1A-210ENST00000551981 TRAV38-1A0A0B4J264 116 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 A0A0G2JND7 137 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 BBIP1A8MTZ0 92 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 C3orf80F5H4A9 247 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 J3KTA2 159 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 SOCS2O14508 198 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 MRASO14807 208 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 FFAR1O14842 300 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 ALX3O95076 343 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 ECDO95905 644 aaPredicted RBP11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 ZNF26P17031 533 aaPredicted RBP11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 FUT4P22083 530 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 CRABP1P29762 137 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 PRSS12P56730 875 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 ARF6P62330 175 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 COX10Q12887 443 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 ECH1Q13011 328 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 MPPED2Q15777 294 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 TBPL2Q6SJ96 375 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 Q6ZSV7 163 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 PGAP1Q75T13 922 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 PLPP7Q8NBV4 271 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 SLCO4A1Q96BD0 722 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 NRIP3Q9NQ35 241 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 INTS9Q9NV88 658 aaKnown RBP11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 SNX13Q9Y5W8 968 aa11.73□□□□□ -0.53
CHMP1A-210ENST00000551981 OOEPA6NGQ2 149 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 F5H5K5 113 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 GMDSO60547 372 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 LCATP04180 440 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 FBP1P09467 338 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 ACSM4P0C7M7 580 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 CA6P23280 308 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 RPS6KA3P51812 740 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 MAPRE2Q15555 327 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 MEP1BQ16820 701 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 HIST2H2BDQ6DRA6 164 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 CORO6Q6QEF8 472 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 BTN2A1Q7KYR7 527 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 MRPL21Q7Z2W9 205 aaKnown RBP11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 VTCN1Q7Z7D3 282 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 CYP4Z1Q86W10 505 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 FAM46AQ96IP4 442 aaKnown RBP11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 GPX7Q96SL4 187 aaPredicted RBP11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 PITX2Q99697 317 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 ADAT1Q9BUB4 502 aaKnown RBP11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 ANKRD19PQ9H560 264 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 SMURF1Q9HCE7 757 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 GID8Q9NWU2 228 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 AURKCQ9UQB9 309 aa11.72□□□□□ -0.53
CHMP1A-210ENST00000551981 NBEAL2Q6ZNJ1 2754 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 IMPA2O14732 288 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 PTBP3O95758 552 aaKnown RBP11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 ZNF682O95780 498 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 MZT1Q08AG7 82 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 KRTAP27-1Q3LI81 207 aa11.71□□□□□ -0.53
CHMP1A-210ENST00000551981 SLC36A3Q495N2 470 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms