RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 RFX2P48378 723 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 DMRTC1Q5HYR2 192 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 MTFR2Q6P444 385 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 RNF144BQ7Z419 303 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 NRARPQ7Z6K4 114 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 ZADH2Q8N4Q0 377 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 OR5M9Q8NGP3 310 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 WACQ9BTA9 647 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 MED12LQ86YW9 2145 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 RNPS1Q15287 305 aaKnown RBP17.24■□□□□ 0.35
SSH1-209ENST00000551165 RNASE12Q5GAN4 147 aaKnown RBP17.24■□□□□ 0.35
SSH1-209ENST00000551165 UBE2NLQ5JXB2 153 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 SLC16A14Q7RTX9 510 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 MCEMP1Q8IX19 187 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 LINC00470Q9BZP3 86 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 MOB1AQ9H8S9 216 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 PARPBPQ9NWS1 579 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 ZNF224Q9NZL3 707 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 LUZP4Q9P127 313 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 CKLFQ9UBR5 152 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 STEAP1Q9UHE8 339 aa17.24■□□□□ 0.35
SSH1-209ENST00000551165 A0A1B0GVI7 797 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 GNALP38405 381 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 EIF2S3P41091 472 aaKnown RBP17.23■□□□□ 0.35
SSH1-209ENST00000551165 EFNB2P52799 333 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 FAPQ12884 760 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 ZNF169Q14929 603 aaPredicted RBP17.23■□□□□ 0.35
SSH1-209ENST00000551165 SNAI3Q3KNW1 292 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 BIVMQ86UB2 503 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 THRSPQ92748 146 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 GCDHQ92947 438 aaPredicted RBP17.23■□□□□ 0.35
SSH1-209ENST00000551165 APH1AQ96BI3 265 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 PGAM5Q96HS1 289 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 ZFP3Q96NJ6 502 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 WNT5BQ9H1J7 359 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 BSNQ9UPA5 3926 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 ZNF503-AS2A6NEH8 195 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 M0R135 149 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 CRYGSP22914 178 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 SCN1BQ07699 218 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 SYNPRQ8TBG9 265 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 ZNF799Q96GE5 643 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 C11orf54Q9H0W9 315 aaPredicted RBP17.23■□□□□ 0.35
SSH1-209ENST00000551165 RNF122Q9H9V4 155 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 SLC17A5Q9NRA2 495 aa17.23■□□□□ 0.35
SSH1-209ENST00000551165 PTTG1O95997 202 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 PTBP1P26599 531 aaKnown RBP eCLIP17.22■□□□□ 0.35
SSH1-209ENST00000551165 AGTR1P30556 359 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 PRSS12P56730 875 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 DEFA1P59665 94 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 DEFA3P59666 94 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 RAB35Q15286 201 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 GLYATL3Q5SZD4 288 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 FAM166AQ6J272 317 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 IGFL3Q6UXB1 125 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 SIAH3Q8IW03 269 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 SLC25A28Q96A46 364 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 OR2H1Q9GZK4 316 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 PRDM14Q9GZV8 571 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 SP140LQ9H930 580 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 ARHGAP21Q5T5U3 1957 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 SPTBN4Q9H254 2564 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 MMP7P09237 267 aaPredicted RBP17.22■□□□□ 0.35
SSH1-209ENST00000551165 CALCBP10092 127 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 PTHLHP12272 177 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 CCBE1Q6UXH8 406 aaPredicted RBP17.22■□□□□ 0.35
SSH1-209ENST00000551165 MINDY2Q8NBR6 621 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 OR13C9Q8NGT0 318 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 OR1F12Q8NHA8 337 aa17.22■□□□□ 0.35
SSH1-209ENST00000551165 MYEF2Q9P2K5 600 aaKnown RBP17.22■□□□□ 0.35
SSH1-209ENST00000551165 SVILO95425 2214 aa17.21■□□□□ 0.35
SSH1-209ENST00000551165 CACNA1GO43497 2377 aa17.21■□□□□ 0.35
SSH1-209ENST00000551165 FUOMA2VDF0 154 aa17.21■□□□□ 0.35
SSH1-209ENST00000551165 SLC17A2O00624 439 aa17.21■□□□□ 0.35
SSH1-209ENST00000551165 LYPD6Q86Y78 171 aa17.21■□□□□ 0.35
SSH1-209ENST00000551165 SPACA3Q8IXA5 215 aa17.21■□□□□ 0.35
SSH1-209ENST00000551165 ZNF100Q8IYN0 542 aa17.21■□□□□ 0.35
SSH1-209ENST00000551165 GCNT2Q8N0V5 402 aa17.21■□□□□ 0.35
SSH1-209ENST00000551165 OR52N4Q8NGI2 321 aa17.21■□□□□ 0.35
SSH1-209ENST00000551165 SNRNP27Q8WVK2 155 aaKnown RBP17.21■□□□□ 0.35
SSH1-209ENST00000551165 UPB1Q9UBR1 384 aa17.21■□□□□ 0.35
SSH1-209ENST00000551165 OR6C6A6NF89 314 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 ZNF587BE7ETH6 402 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 EEF1E1O43324 174 aaKnown RBP17.21■□□□□ 0.34
SSH1-209ENST00000551165 POU3F4P49335 361 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 C2orf76Q3KRA6 126 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 TRIQKQ629K1 86 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 JAGN1Q8N5M9 183 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 CELF2-AS1Q8N7Q2 184 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 RBMXL3Q8N7X1 1067 aaKnown RBP17.21■□□□□ 0.34
SSH1-209ENST00000551165 CPEB3Q8NE35 698 aaKnown RBP17.21■□□□□ 0.34
SSH1-209ENST00000551165 SPACA5Q96QH8 159 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 TRIB1Q96RU8 372 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 RHBDD3Q9Y3P4 386 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 TIMM10BQ9Y5J6 103 aa17.21■□□□□ 0.34
SSH1-209ENST00000551165 RPL36A-HNRNPH2H7BZ11 118 aa17.2■□□□□ 0.34
SSH1-209ENST00000551165 PFDN1O60925 122 aa17.2■□□□□ 0.34
SSH1-209ENST00000551165 IGLV3-1P01715 115 aa17.2■□□□□ 0.34
SSH1-209ENST00000551165 HLA-HP01893 362 aa17.2■□□□□ 0.34
SSH1-209ENST00000551165 HLA-DQB1P01920 261 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms