RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 NDNFQ8TB73 568 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 HAVCR2Q8TDQ0 301 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 GHSRQ92847 366 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 BOD1Q96IK1 185 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF75AQ96N20 296 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 KCNJ15Q99712 375 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 COQ7Q99807 217 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 VKORC1Q9BQB6 163 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 WACQ9BTA9 647 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 HDHD5Q9BXW7 423 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 HDHD2Q9H0R4 259 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 PPIL3Q9H2H8 161 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 NIPAL2Q9H841 368 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 EXOSC4Q9NPD3 245 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 TXNL4BQ9NX01 149 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 B3GNT2Q9NY97 397 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 PLEK2Q9NYT0 353 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF319Q9P2F9 582 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 MEMO1Q9Y316 297 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 TRGV8A0A0C4DH27 118 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 TRBV5-5A0A0J9YX44 114 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 TMEM269A0A1B0GVZ9 245 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 TMEM212A6NML5 194 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 LOC110117498-PIK3R3F6TDL0 507 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 PIN1P1O15428 100 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 GPRIN2O60269 458 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 NOL3O60936 208 aaKnown RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 TTRP02766 147 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 ACSM4P0C7M7 580 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 SLC2A1P11166 492 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 CD79AP11912 226 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 GALP22466 123 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 PSMA1P25786 263 aaKnown RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 HSD11B1P28845 292 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 FGF9P31371 208 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 HTR5AP47898 357 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 CX3CR1P49238 355 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 CCR9P51686 369 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF121P58317 390 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 PCBD1P61457 104 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 ODF4Q2M2E3 257 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF829Q3KNS6 432 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 TIMM50Q3ZCQ8 353 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 UNQ9370/PRO34162Q6UXP9 181 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 GDPGP1Q6ZNW5 385 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 BEND4Q6ZU67 534 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 MDP1Q86V88 176 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 MYPOPQ86VE0 399 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 CXorf67Q86X51 503 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF584Q8IVC4 421 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 RDH10Q8IZV5 341 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF283Q8N7M2 679 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 WDR31Q8NA23 367 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 CPEB3Q8NE35 698 aaKnown RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 C1orf162Q8NEQ5 155 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 OR8B12Q8NGG6 310 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 OR51A4Q8NGJ6 313 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 OR5AK2Q8NH90 309 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 OR1F12Q8NHA8 337 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 ABHD4Q8TB40 342 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 PBOV1Q9GZY1 135 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 RNF121Q9H920 327 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 SLC17A5Q9NRA2 495 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 NUFIP1Q9UHK0 495 aaKnown RBP7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 OR52A1Q9UKL2 312 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 SSR3Q9UNL2 185 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 GTF2A1LQ9UNN4 478 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 OSGIN2Q9Y236 505 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF281Q9Y2X9 895 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 TIMM10BQ9Y5J6 103 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 TENM4Q6N022 2769 aa7.04□□□□□ -1.28
DEPDC4-207ENST00000549249 HEATR1Q9H583 2144 aaKnown RBP7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 LOC100509620A0A075B734 347 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 ARPC4-TTLL3A0A0A6YYG9 625 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 A0A1B0GTI1 187 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 LOC107986453A0A1B0GWG9 222 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 A0A1W2PR80 420 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 CIB4A0PJX0 185 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 A8MXE2 369 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 F5H5K5 113 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 H3BSH0 61 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 M0R135 149 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 SLC22A1O15245 554 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 UBL3O95164 117 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 IGLV3-1P01715 115 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 HLA-DPB1P04440 258 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 CLEC2LP0C7M8 214 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 COX5BP10606 129 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF182P17025 639 aaPredicted RBP7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 BMP5P22003 454 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 APEX1P27695 318 aaKnown RBP7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 CCKARP32238 428 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 UGT2B10P36537 528 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 SERPINB10P48595 397 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 RAB1AP62820 205 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 GALK2Q01415 458 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 TGFBR3Q03167 851 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 TAF13Q15543 124 aa7.03□□□□□ -1.28
DEPDC4-207ENST00000549249 TRAM1Q15629 374 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms