RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 OR10S1Q8NGN2 331 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 MCUR1Q96AQ8 359 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 MAP6Q96JE9 813 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 TMEM246Q9BRR3 403 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 HCAR1Q9BXC0 346 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 CDH10Q9Y6N8 788 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 IGHV2-70DA0A0C4DH43 119 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 LRRC30A6NM36 301 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 IDH3BO43837 385 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 PPIAL4GP0DN37 164 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 IGHV4-38-2P0DP08 117 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 HKR1P10072 659 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 PSKH1P11801 424 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 ANOS1P23352 680 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 PRTN3P24158 256 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 IFNGR2P38484 337 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 RAD23AP54725 363 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 TSPAN31Q12999 210 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 MAB21L1Q13394 359 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 NAA40Q86UY6 237 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 PARP8Q8N3A8 854 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 OR52E2Q8NGJ4 325 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 OR2AJ1Q8NGZ0 328 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 Q8TCH9 128 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 NEIL1Q96FI4 390 aaPredicted RBP14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 DUX5Q96PT3 197 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 EGLN3Q9H6Z9 239 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 ZMAT3Q9HA38 289 aaKnown RBP14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 IL1RAPQ9NPH3 570 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 TMEM100Q9NV29 134 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 MIOXQ9UGB7 285 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 KCNG2Q9UJ96 466 aa14.54□□□□□ -0.08
CHMP1A-205ENST00000548650 M0R135 149 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 BHLHE40O14503 412 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 SPRY1O43609 319 aaPredicted RBP14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 HLA-DQA2P01906 255 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 LCATP04180 440 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 CD200P41217 278 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 GNB2P62879 340 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 CLEC12AQ5QGZ9 265 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 SLC35F1Q5T1Q4 408 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 C9orf139Q6ZV77 190 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 ZDHHC21Q8IVQ6 265 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 C1orf87Q8N0U7 546 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 CELF2-AS1Q8N7Q2 184 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 SGMS2Q8NHU3 365 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 GNPDA2Q8TDQ7 276 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 UPRTQ96BW1 309 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 ZNF799Q96GE5 643 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 BTBD10Q9BSF8 475 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 NSRP1Q9H0G5 558 aaKnown RBP14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 TMCC3Q9ULS5 477 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 LYVE1Q9Y5Y7 322 aa14.53□□□□□ -0.08
CHMP1A-205ENST00000548650 TRAV40A0A0B4J280 105 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 FAM20BO75063 409 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 PLATP00750 562 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 OTX1P32242 354 aaPredicted RBP14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 PYCR1P32322 319 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 RPS27P42677 84 aaKnown RBP14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 PITPNBP48739 271 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 MALLQ13021 153 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 SNAI3Q3KNW1 292 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 PRAMEF6Q5VXH4 476 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 LYPD4Q6UWN0 246 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 BTNL3Q6UXE8 466 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 LRRN1Q6UXK5 716 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 NLRC3Q7RTR2 1065 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 CYB561A3Q8NBI2 242 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 OR9Q2Q8NGE9 314 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 OR8B3Q8NGG8 313 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 OR52L1Q8NGH7 329 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 OR8D4Q8NGM9 314 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 ZNRF4Q8WWF5 429 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 RAB40AQ8WXH6 277 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 SLCO4A1Q96BD0 722 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 OR8B2Q96RD0 313 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 CDRT15Q96T59 188 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 DDOQ99489 341 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 CDADC1Q9BWV3 514 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 ARL8BQ9NVJ2 186 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 TAGLN3Q9UI15 199 aa14.52□□□□□ -0.09
CHMP1A-205ENST00000548650 IGHV3OR16-10A0A075B7F0 116 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 C5orf63A6NC05 138 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 CLDN34H7C241 214 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 RNASE1P07998 156 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 ATP6V1B2P21281 511 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 GYS2P54840 703 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 TPTEP56180 551 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 HOXA4Q00056 320 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 FOXL1Q12952 345 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 BAMBIQ13145 260 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 ZNF770Q6IQ21 691 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 RPL13AP3Q6NVV1 102 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 LYPD2Q6UXB3 125 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 DCDC5Q6ZRR9 648 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 PGAP1Q75T13 922 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 MRPL21Q7Z2W9 205 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 PROKR2Q8NFJ6 384 aa14.51□□□□□ -0.09
CHMP1A-205ENST00000548650 ERGIC1Q969X5 290 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms