RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 IQANK1A0A1B0GTG1 560 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 SERTM2A0A1B0GWG4 89 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 A6NIZ1 184 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 C21orf140B9A014 251 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 PANO1I0J062 215 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 PES1O00541 588 aaKnown RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 CASC3O15234 703 aaKnown RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 LSM8O95777 96 aaKnown RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 AGTP01019 485 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 GAPDHP04406 335 aaKnown RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 FGF1P05230 155 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 PLEKP08567 350 aaPredicted RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 ANXA8P13928 327 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 GPR1P46091 355 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 UQCRFS1P47985 274 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 NUP107P57740 925 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 RAP1BP61224 184 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 RPS15P62841 145 aaKnown RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 TGFBR3Q03167 851 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 DAZ2Q13117 558 aaKnown RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 TMED1Q13445 227 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 PNOCQ13519 176 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 PPP1R7Q15435 360 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 CHRNA6Q15825 494 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 EXOC3L4Q17RC7 722 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 SAMD4BQ5PRF9 694 aaKnown RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 ANXA8L1Q5VT79 327 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 TIGD3Q6B0B8 471 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 UQCC3Q6UW78 93 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 ANGPTL8Q6UXH0 198 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 HSDL2Q6YN16 418 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 STRADAQ7RTN6 431 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 SH2D6Q7Z4S9 175 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 PIANPQ8IYJ0 282 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 C20orf203Q8NBC4 194 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 PDCD6IPQ8WUM4 868 aaKnown RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 NELFBQ8WX92 580 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 CMTM7Q96FZ5 175 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 ITCHQ96J02 903 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 OR2M4Q96R27 311 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 FAM192AQ9GZU8 254 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 PDFQ9HBH1 243 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 DAZ3Q9NR90 486 aaKnown RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 SPATA7Q9P0W8 599 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 SEC14L3Q9UDX4 400 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 DNAJC12Q9UKB3 198 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 PSME2Q9UL46 239 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 TMCO1Q9UM00 188 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 NPTNQ9Y639 398 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 KIF26AQ9ULI4 1882 aaPredicted RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 AKAP13Q12802 2813 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 COL5A1P20908 1838 aaPredicted RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 TSC2P49815 1807 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 DMXL2Q8TDJ6 3036 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 A0A075B6Q4 140 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 TSPAN11A1L157 253 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 HEATR9A2RTY3 570 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 NCF1BA6NI72 391 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ARGFXA6NJG6 315 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 OR5B21A6NL26 309 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 OR5K4A6NMS3 321 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 USP27XA6NNY8 438 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 NCF1CA8MVU1 366 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 TCP11X1B4DZS4 312 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 PSMD11O00231 422 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 TOX3O15405 576 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF861PO60384 105 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 NPIPB7O75200 414 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 CTAG2O75638 210 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 OXSR1O95747 527 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 CD160O95971 181 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 KLK3P07288 261 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 IVLP07476 585 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ATP1B2P14415 290 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ETS2P15036 469 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 CD1EP15812 388 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 TBPP20226 339 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ATP6V1B2P21281 511 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 COX7A1P24310 79 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 AK4P27144 223 aaPredicted RBP2.76□□□□□ -1.97
PTCH1-216ENST00000548379 CASQ1P31415 396 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 CTRLP40313 264 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 VHLP40337 213 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 CSNK1DP48730 415 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 CAV2P51636 162 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 WNT4P56705 351 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 TPI1P60174 286 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 AP1S1P61966 158 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 SELENOTP62341 195 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 PSG7Q13046 419 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 GK3PQ14409 553 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF235Q14590 738 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 GNMTQ14749 295 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 ARHGAP19Q14CB8 494 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 PTPN20Q4JDL3 420 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 PRAMEF5Q5TYX0 476 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 PRAMEF6Q5VXH4 476 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 C1orf94Q6P1W5 598 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 TMIGD1Q6UXZ0 262 aa2.76□□□□□ -1.97
PTCH1-216ENST00000548379 EGFL6Q8IUX8 553 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms