RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 GJC3Q8NFK1 279 aa12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 RAB40AQ8WXH6 277 aa12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 NEIL1Q96FI4 390 aaPredicted RBP12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 MAP6Q96JE9 813 aa12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 COG8Q96MW5 612 aa12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 ZNF582Q96NG8 517 aaPredicted RBP12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 TNFRSF19Q9NS68 423 aa12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 UFSP2Q9NUQ7 469 aa12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 DCAF13Q9NV06 445 aaKnown RBP12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 TMCC3Q9ULS5 477 aa12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 AURKCQ9UQB9 309 aa12.67□□□□□ -0.38
SNX29P1-201ENST00000548357 J3QW42 95 aa12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 FPR3P25089 353 aa12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 MSX2P35548 267 aaPredicted RBP12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 MDH1P40925 334 aaKnown RBP12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 PITPNBP48739 271 aa12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 SRP9P49458 86 aaKnown RBP12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 FGF12P61328 243 aa12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 TRAP1Q12931 704 aaKnown RBP12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 ZNF181Q2M3W8 571 aa12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 SNAI3Q3KNW1 292 aa12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 WDR25Q64LD2 544 aaPredicted RBP12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 NUDT16L1Q9BRJ7 211 aaKnown RBP12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 MYLK2Q9H1R3 596 aa12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 MIOXQ9UGB7 285 aa12.66□□□□□ -0.38
SNX29P1-201ENST00000548357 CLDN34H7C241 214 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 HOXA3O43365 443 aaPredicted RBP12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 SFTPBP07988 381 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 CRABP1P29762 137 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 PYCR1P32322 319 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 GATA4P43694 442 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 ELF3P78545 371 aaPredicted RBP12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 RELBQ01201 579 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 SPIBQ01892 262 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 RFX4Q33E94 735 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 LRRN1Q6UXK5 716 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 ZBTB46Q86UZ6 589 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 FGFRL1Q8N441 504 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 OR8B3Q8NGG8 313 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 OR5L1Q8NGL2 311 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 OR2AE1Q8NHA4 323 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 SLCO4A1Q96BD0 722 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 OR8B2Q96RD0 313 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 PITX2Q99697 317 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 ATF6BQ99941 703 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 NDEL1Q9GZM8 345 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 EGLN3Q9H6Z9 239 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 ZMAT3Q9HA38 289 aaKnown RBP12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 EFCAB1Q9HAE3 211 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 SMURF1Q9HCE7 757 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 TMEM100Q9NV29 134 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 CYB5R1Q9UHQ9 305 aa12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 FAM32AQ9Y421 112 aaKnown RBP12.65□□□□□ -0.38
SNX29P1-201ENST00000548357 KIR2DS1A0A191URI9 304 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 TVP23AA6NH52 213 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 IFNL4K9M1U5 179 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 PPIAL4GP0DN37 164 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 PSMB10P40306 273 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 CD200P41217 278 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 SLC35F1Q5T1Q4 408 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 SFRP4Q6FHJ7 346 aaPredicted RBP12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 BTNL3Q6UXE8 466 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 SPATC1Q76KD6 591 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 CYB561A3Q8NBI2 242 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 Q8TCH9 128 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 SLC25A28Q96A46 364 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 IFT27Q9BW83 186 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 RASSF4Q9H2L5 321 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 MARCH7Q9H992 704 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 ADA2Q9NZK5 511 aa12.64□□□□□ -0.39
SNX29P1-201ENST00000548357 A0A1B0GW55 424 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 TNFRSF13BO14836 293 aaPredicted RBP12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 ARPC3O15145 178 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 GADD45GO95257 159 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 LCATP04180 440 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 DUX4L2P0CJ85 424 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 DUX4L3P0CJ86 424 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 DUX4L4P0CJ87 422 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 DUX4L5P0CJ88 424 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 DUX4L6P0CJ89 424 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 DUX4L7P0CJ90 424 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 MMP9P14780 707 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 CA6P23280 308 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 SLC6A6P31641 620 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 GSSP48637 474 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 KRTAP10-3P60369 221 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 IL13RA1P78552 427 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 ZNF92Q03936 586 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 GLYATL3Q5SZD4 288 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 DNM1P34Q6PK57 102 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 DUX4L9Q6RFH8 374 aaPredicted RBP12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 TREML4Q6UXN2 200 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 ZNF620Q6ZNG0 422 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 DCDC5Q6ZRR9 648 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 ZNF826PQ6ZT77 177 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 BOLLQ8N9W6 283 aaKnown RBP12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 OR8D4Q8NGM9 314 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 TMIGD2Q96BF3 282 aa12.63□□□□□ -0.39
SNX29P1-201ENST00000548357 TBX15Q96SF7 602 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms