RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 NUBP2Q9Y5Y2 271 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 A0A1B0GTI1 187 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 WIPF3A6NGB9 483 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 ZNF878C9JN71 531 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 ACOT7O00154 380 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 RGS13O14921 159 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 MT-CO3P00414 261 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 RLN1P04808 185 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 B4GALT1P15291 398 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 ACHEP22303 614 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 MMP16P51512 607 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 NKPD1Q17RQ9 610 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 OLFML2AQ68BL7 652 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 GVQW1Q8N7I0 195 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 OR11H4Q8NGC9 324 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 OR51S1Q8NGJ8 323 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 OR2AE1Q8NHA4 323 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 LILRB4Q8NHJ6 448 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 NICN1Q9BSH3 213 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 BANF2Q9H503 90 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 NOX3Q9HBY0 568 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 ING3Q9NXR8 418 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 PIEZO2Q9H5I5 2752 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 CEP295Q9C0D2 2601 aa9.78□□□□□ -0.84
CUX1-212ENST00000547394 CCDC187A0A096LP49 1063 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 A0A1B0GVI7 797 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 ANKRD20A5PA0PJZ0 165 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 PYCARD-AS1I3L0S3 204 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 HRGP04196 525 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 SPINK2P20155 84 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 PSMB1P20618 241 aaKnown RBP9.77□□□□□ -0.84
CUX1-212ENST00000547394 STOMP27105 288 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 ADH6P28332 368 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 CARD18P57730 90 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 PMPCAQ10713 525 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 FAPQ12884 760 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 SSPNQ14714 243 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 TMEM244Q5VVB8 128 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 FAM166AQ6J272 317 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 ZNF704Q6ZNC4 412 aaPredicted RBP9.77□□□□□ -0.84
CUX1-212ENST00000547394 ELMOD2Q8IZ81 293 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 OR10D3Q8NH80 312 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 PIGQQ9BRB3 760 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 ULBP2Q9BZM5 246 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 OR2B2Q9GZK3 357 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 CHST6Q9GZX3 395 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 CRLF2Q9HC73 371 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 DIABLOQ9NR28 239 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 ETV7Q9Y603 341 aa9.77□□□□□ -0.84
CUX1-212ENST00000547394 COL27A1Q8IZC6 1860 aaPredicted RBP9.77□□□□□ -0.85
CUX1-212ENST00000547394 CTDSPLO15194 276 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 RBBP9O75884 186 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 SIX6O95475 246 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 ZNF17P17021 662 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 OR3A4PP47883 348 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 ZP1P60852 638 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 PLA2G2CQ5R387 149 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 C17orf107Q6ZR85 190 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 BTN2A1Q7KYR7 527 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 GGNQ86UU5 652 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 TMEM104Q8NE00 496 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 OR10K1Q8NGX5 313 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 NUDCD2Q8WVJ2 157 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 FBXO17Q96EF6 278 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 PLEK2Q9NYT0 353 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 ZNF69Q9UC07 566 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 NPIPB13A6NJU9 1138 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 NPIPB4C9JG80 1138 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 PMS2P2O95744 297 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 PLATP00750 562 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 YES1P07947 543 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 UBCP0CG48 685 aaKnown RBP9.77□□□□□ -0.85
CUX1-212ENST00000547394 ZNF20P17024 532 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 SSTR2P30874 369 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 MNDAP41218 407 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 GUCA1AP43080 201 aaPredicted RBP9.77□□□□□ -0.85
CUX1-212ENST00000547394 RAC1P63000 192 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 MAB21L1Q13394 359 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 UNC119Q13432 240 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 ENDOGQ14249 297 aaKnown RBP9.77□□□□□ -0.85
CUX1-212ENST00000547394 CDK10Q15131 360 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 OR52W1Q6IF63 320 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 TMEM81Q6P7N7 255 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 ZNF782Q6ZMW2 699 aaPredicted RBP9.77□□□□□ -0.85
CUX1-212ENST00000547394 ZNF813Q6ZN06 617 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 OR1M1Q8NGA1 313 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 AKR7LQ8NHP1 331 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 PCNPQ8WW12 178 aaKnown RBP9.77□□□□□ -0.85
CUX1-212ENST00000547394 TINAGL1Q9GZM7 467 aaPredicted RBP9.77□□□□□ -0.85
CUX1-212ENST00000547394 FANCFQ9NPI8 374 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 CA10Q9NS85 328 aa9.77□□□□□ -0.85
CUX1-212ENST00000547394 SERPINA7P05543 415 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 GNB3P16520 340 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 FAHP16930 419 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 POU3F2P20265 443 aaPredicted RBP9.76□□□□□ -0.85
CUX1-212ENST00000547394 BDKRB2P30411 391 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 PRSS3P35030 304 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 GZMKP49863 264 aa9.76□□□□□ -0.85
CUX1-212ENST00000547394 PSMA6P60900 246 aaKnown RBP9.76□□□□□ -0.85
CUX1-212ENST00000547394 BTG1P62324 171 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms