RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TOLLIPQ9H0E2 274 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 OR51M1Q9H341 326 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 ZNF407Q9C0G0 2248 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 FHOD3Q2V2M9 1422 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 A0A1B0GW55 424 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 A0A1W2PNN7 141 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 GOLGA8OA6NCC3 632 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 GOLGA6L4A6NEF3 574 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 OR6C70A6NIJ9 312 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 OR5H1A6NKK0 313 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 GOLGA8NF8WBI6 632 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 SMKR1H3BMG3 65 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 SIRPB1O00241 398 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 AIM2O14862 343 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 CLOCKO15516 846 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 IGLV6-57P01721 117 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 DUX4L2P0CJ85 424 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 DUX4L3P0CJ86 424 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 DUX4L5P0CJ88 424 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 DUX4L6P0CJ89 424 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 DUX4L7P0CJ90 424 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 TROVE2P10155 538 aaKnown RBP eCLIP1.49□□□□□ -2.17
CCDC38-204ENST00000546816 ZNF24P17028 368 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 GGT1P19440 569 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 LOXP28300 417 aaPredicted RBP1.49□□□□□ -2.17
CCDC38-204ENST00000546816 RRM2P31350 389 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 SLC1A1P43005 524 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 RPL23P62829 140 aaKnown RBP1.49□□□□□ -2.17
CCDC38-204ENST00000546816 LRRC74AQ0VAA2 488 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 BAMBIQ13145 260 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 RCAN2Q14206 197 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 CHRNA6Q15825 494 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 NKAIN4Q8IVV8 208 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 OR4M1Q8NGD0 313 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 SLC29A1Q99808 456 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 EDA2RQ9HAV5 297 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 CCDC59Q9P031 241 aaKnown RBP1.49□□□□□ -2.17
CCDC38-204ENST00000546816 DUX4Q9UBX2 424 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 ZSWIM8A7E2V4 1837 aa1.49□□□□□ -2.17
CCDC38-204ENST00000546816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.48□□□□□ -2.17
CCDC38-204ENST00000546816 IGHV3OR16-9A0A0B4J2B5 98 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 IGHV1-69DA0A0B4J2H0 117 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 A0A0J9YXV3 536 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 H7C0C1 242 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 L7N2F9 121 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 MANBAO00462 879 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 DNALI1O14645 258 aaPredicted RBP1.48□□□□□ -2.17
CCDC38-204ENST00000546816 SCAMP2O15127 329 aaKnown RBP1.48□□□□□ -2.17
CCDC38-204ENST00000546816 RAD51CO43502 376 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 RDH16O75452 317 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 CIB2O75838 187 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 OR2J3O76001 311 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 ARG1P05089 322 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 SERPINE2P07093 398 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 ANXA5P08758 320 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 ACSM4P0C7M7 580 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 OTX1P32242 354 aaPredicted RBP1.48□□□□□ -2.17
CCDC38-204ENST00000546816 ATP5OP48047 213 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 UBE2E1P51965 193 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 RBX1P62877 108 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 SP4Q02446 784 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 SIGLEC14Q08ET2 396 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 PNOCQ13519 176 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 ARMC12Q5T9G4 340 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 C9orf135Q5VTT2 229 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 HCP5Q6MZN7 132 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 PRSS54Q6PEW0 395 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 ERO1BQ86YB8 467 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 CBR4Q8N4T8 237 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 CSGALNACT2Q8N6G5 542 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 OR5T1Q8NG75 326 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 OR52E2Q8NGJ4 325 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 OR6Q1Q8NGQ2 317 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 LRRC29Q8WV35 223 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 ZBED3Q96IU2 234 aaPredicted RBP1.48□□□□□ -2.17
CCDC38-204ENST00000546816 RHOXF2Q9BQY4 288 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 CCDC77Q9BR77 488 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 CENPKQ9BS16 269 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 ANGPTL4Q9BY76 406 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 TMEM27Q9HBJ8 222 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 IL37Q9NZH6 218 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 TSPOAP1O95153 1857 aa1.48□□□□□ -2.17
CCDC38-204ENST00000546816 THADAQ6YHU6 1953 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 TRBV9A0A0B4J1U6 114 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 TRBV11-1A0A0K0K1C0 115 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 OR2AG2A6NM03 316 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 CCDC169A6NNP5 214 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 C9JVG2 144 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 H7C417 338 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 AP3B1O00203 1094 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 RNF13O43567 381 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 EIF4EP06730 217 aaKnown RBP1.47□□□□□ -2.17
CCDC38-204ENST00000546816 HTR1DP28221 377 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 RAB10P61026 200 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 RPS23P62266 143 aaKnown RBP1.47□□□□□ -2.17
CCDC38-204ENST00000546816 HMGN5P82970 282 aaKnown RBP1.47□□□□□ -2.17
CCDC38-204ENST00000546816 TGM3Q08188 693 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 MRPL23Q16540 153 aaKnown RBP1.47□□□□□ -2.17
CCDC38-204ENST00000546816 CCDC183Q5T5S1 534 aa1.47□□□□□ -2.17
CCDC38-204ENST00000546816 C1orf185Q5T7R7 199 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms