RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 MTNR1AP48039 350 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 CX3CR1P49238 355 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 HCCSP53701 268 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 DSCR9P59020 149 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 ROM1Q03395 351 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 PCGF3Q3KNV8 242 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 KRT77Q7Z794 578 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 TGIF2LYQ8IUE0 185 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 ZCCHC24Q8N2G6 241 aaKnown RBP14.37□□□□□ -0.11
CCDC38-203ENST00000546803 WFDC11Q8NEX6 87 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 OR2T27Q8NH04 317 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 MROQ9BYG7 248 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 MYOZ1Q9NP98 299 aaPredicted RBP14.37□□□□□ -0.11
CCDC38-203ENST00000546803 NKIRAS2Q9NYR9 191 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 PTTG3PQ9NZH4 202 aa14.37□□□□□ -0.11
CCDC38-203ENST00000546803 PLCE1Q9P212 2302 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 H0YAE9 185 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 SSX4O60224 188 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 NAT2P11245 290 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 ZNF81P51508 661 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 MMP15P51511 669 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 ZNF121P58317 390 aaPredicted RBP14.36□□□□□ -0.11
CCDC38-203ENST00000546803 ADARB1P78563 741 aaKnown RBP14.36□□□□□ -0.11
CCDC38-203ENST00000546803 EGR3Q06889 387 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 IL18R1Q13478 541 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 RIPK1Q13546 671 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 CLEC12BQ2HXU8 276 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 SNAI3Q3KNW1 292 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 ALKBH6Q3KRA9 238 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 TMEM255AQ5JRV8 349 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 ZNF322Q6U7Q0 402 aaPredicted RBP14.36□□□□□ -0.11
CCDC38-203ENST00000546803 LRRN1Q6UXK5 716 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 ZNF679Q8IYX0 411 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 SETD9Q8NE22 299 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 OR52H1Q8NGJ2 320 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 CYGBQ8WWM9 190 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 OR8B4Q96RC9 309 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 TPK1Q9H3S4 243 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 OPA3Q9H6K4 179 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 COPS3Q9UNS2 423 aa14.36□□□□□ -0.11
CCDC38-203ENST00000546803 ACOD1A6NK06 481 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 H0YJX3 145 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 XRCC2O43543 280 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 ANXA2P07355 339 aaKnown RBP14.35□□□□□ -0.11
CCDC38-203ENST00000546803 SLC2A1P11166 492 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 CXCR4P61073 352 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 GK2Q14410 553 aaPredicted RBP14.35□□□□□ -0.11
CCDC38-203ENST00000546803 HLXQ14774 488 aaPredicted RBP14.35□□□□□ -0.11
CCDC38-203ENST00000546803 FAM209AQ5JX71 171 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 ZNF691Q5VV52 312 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 CLEC2AQ6UVW9 174 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 DNM1P46Q6ZS02 220 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 PGAP1Q75T13 922 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 PRSS45Q7RTY3 260 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 MRPL21Q7Z2W9 205 aaKnown RBP14.35□□□□□ -0.11
CCDC38-203ENST00000546803 RNFT2Q96EX2 444 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 Q96MF0 132 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 DIRC2Q96SL1 478 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 ADI1Q9BV57 179 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 VCX3BQ9H321 246 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 ZDHHC8Q9ULC8 765 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 LRP12Q9Y561 859 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 PCDHGB1Q9Y5G3 927 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 HSPE1-MOB4S4R3N1 261 aa14.35□□□□□ -0.11
CCDC38-203ENST00000546803 IQCF6A8MYZ5 107 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 ADH4P08319 380 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 CFL1P23528 166 aaKnown RBP14.34□□□□□ -0.11
CCDC38-203ENST00000546803 CAPGP40121 348 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 RIDAP52758 137 aaKnown RBP14.34□□□□□ -0.11
CCDC38-203ENST00000546803 PSMA6P60900 246 aaKnown RBP14.34□□□□□ -0.11
CCDC38-203ENST00000546803 IL5RAQ01344 420 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 GLYATL3Q5SZD4 288 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 OR2T2Q6IF00 324 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 OR10H4Q8NGA5 316 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 UBASH3BQ8TF42 649 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 REPIN1Q9BWE0 567 aaKnown RBP14.34□□□□□ -0.11
CCDC38-203ENST00000546803 OR10A2Q9H208 303 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 RGCCQ9H4X1 137 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 AASSQ9UDR5 926 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 IKZF2Q9UKS7 526 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 N6AMT1Q9Y5N5 214 aa14.34□□□□□ -0.11
CCDC38-203ENST00000546803 ANKRD17O75179 2603 aaKnown RBP14.34□□□□□ -0.11
CCDC38-203ENST00000546803 USF3Q68DE3 2245 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 CCDC168Q8NDH2 2452 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 A0A1W2PQL4 384 aaPredicted RBP14.33□□□□□ -0.12
CCDC38-203ENST00000546803 ZSCAN5BA6NJL1 495 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 APOL3O95236 402 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 DAOP14920 347 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 PDLIM4P50479 330 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 ACTC1P68032 377 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 ACTA1P68133 377 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 MRPS11P82912 194 aaKnown RBP14.33□□□□□ -0.12
CCDC38-203ENST00000546803 ZNF92Q03936 586 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 ZNF91Q05481 1191 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 CDK5R2Q13319 367 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 ZNF829Q3KNS6 432 aaPredicted RBP14.33□□□□□ -0.12
CCDC38-203ENST00000546803 USP51Q70EK9 711 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 FAM57BQ71RH2 274 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 ZNF525Q8N782 197 aa14.33□□□□□ -0.12
CCDC38-203ENST00000546803 OR8G5Q8NG78 346 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms