RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ZMAT3Q9HA38 289 aaKnown RBP11.64□□□□□ -0.55
PTCH1-212ENST00000546744 TMED7-TICAM2A0A0A6YYA0 188 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 ANKRD61A6NGH8 418 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 RD3LP0DJH9 198 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 APLNRP35414 380 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 TAS2R45P59539 299 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 UBE2NP61088 152 aaKnown RBP11.64□□□□□ -0.55
PTCH1-212ENST00000546744 DEGS2Q6QHC5 323 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 OIT3Q8WWZ8 545 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 RASD2Q96D21 266 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 ZNF2Q9BSG1 426 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-212ENST00000546744 TM7SF3Q9NS93 570 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 APOBEC3BQ9UH17 382 aaKnown RBP11.64□□□□□ -0.55
PTCH1-212ENST00000546744 TMED7Q9Y3B3 224 aa11.64□□□□□ -0.55
PTCH1-212ENST00000546744 A0A1W2PPQ1 181 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 ERVH48-1M5A8F1 160 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 GLAP06280 429 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 LIM2P55344 173 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 FOXO1Q12778 655 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 ETFDHQ16134 617 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 MOB3CQ70IA8 216 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 CATSPERDQ86XM0 798 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 OR52B4Q8NGK2 314 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 FBLIM1Q8WUP2 373 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 ASB1Q9Y576 335 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 POM121BA6NF01 834 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 ABCD4O14678 606 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 SFT2D2O95562 160 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 HSD17B7P56937 341 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 PCBP3P57721 371 aaKnown RBP11.63□□□□□ -0.55
PTCH1-212ENST00000546744 PPIAP62937 165 aaKnown RBP11.63□□□□□ -0.55
PTCH1-212ENST00000546744 DUSP5Q16690 384 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 PHF19Q5T6S3 580 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 LMNTD1Q8N9Z9 388 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 S1PR5Q9H228 398 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 PARP11Q9NR21 331 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 OTOFQ9HC10 1997 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 TRBV5-3A0A0A0MS03 114 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 HCRTR1O43613 425 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 BTG2P78543 158 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 FAM209BQ5JX69 171 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 ABI3BPQ7Z7G0 1075 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 TTC9BQ8N6N2 239 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 IL22RA1Q8N6P7 574 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 PIK3IP1Q96FE7 263 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 MS4A10Q96PG2 267 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 GHITMQ9H3K2 345 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 CLN5O75503 358 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 NMBP08949 121 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 DUSP3P51452 185 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-212ENST00000546744 TGFBR3Q03167 851 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 ZNF92Q03936 586 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 SEZ6L2Q6UXD5 910 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 H1FNTQ75WM6 255 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-212ENST00000546744 DCXRQ7Z4W1 244 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 OR2AE1Q8NHA4 323 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 PFN4Q8NHR9 129 aa11.63□□□□□ -0.55
PTCH1-212ENST00000546744 RTN4IP1Q8WWV3 396 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-212ENST00000546744 BSCL2Q96G97 398 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-212ENST00000546744 ISG20L2Q9H9L3 353 aaKnown RBP11.63□□□□□ -0.55
PTCH1-212ENST00000546744 ZNFX1Q9P2E3 1918 aaKnown RBP11.62□□□□□ -0.55
PTCH1-212ENST00000546744 NSG1A0A0A6YYJ2 146 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 CDRT15L2A8MXV6 281 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 H0YGG7 62 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 H3BML4 177 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 IGHA1P01876 353 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 ABOP16442 354 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 G0S2P27469 103 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 USP53Q70EK8 1073 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 OR52N5Q8NH56 324 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 Q9N2K0 584 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 A0A0A6YYC8 382 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-212ENST00000546744 I3L1I5 382 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-212ENST00000546744 VAMP5O95183 116 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 HLA-DQB1P01920 261 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 OR5H8P0DN80 308 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 PTTG1IPP53801 180 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 HLA-DRB3P79483 266 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 SLC24A4Q8NFF2 622 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 OR11H7Q8NGC8 314 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 IL1F10Q8WWZ1 152 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 MS4A6EQ96DS6 147 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 NXF5Q9H1B4 397 aaKnown RBP11.62□□□□□ -0.55
PTCH1-212ENST00000546744 PCED1AQ9H1Q7 454 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 OR14J1Q9UGF5 321 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 SLC23A2Q9UGH3 650 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 RARRES3Q9UL19 164 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 DOCK3Q8IZD9 2030 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 IGLV3-27P01718 113 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 MBPP02686 304 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-212ENST00000546744 HABP2Q14520 560 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-212ENST00000546744 FAM74A3Q4VXF1 159 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 TOMM20LQ6UXN7 152 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 TMEM123Q8N131 208 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 OR10P1Q8NGE3 313 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 OR13C5Q8NGS8 318 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 NXPE3Q969Y0 559 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 INSM2Q96T92 566 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-212ENST00000546744 CA14Q9ULX7 337 aa11.62□□□□□ -0.55
PTCH1-212ENST00000546744 PCDHGA1Q9Y5H4 931 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 921.6 ms