RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ACP6Q9NPH0 428 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.26□□□□□ -2.05
SNHG1-224ENST00000545688 SLC25A37Q9NYZ2 338 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 SEC14L3Q9UDX4 400 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 OR12D3Q9UGF7 316 aa2.26□□□□□ -2.05
SNHG1-224ENST00000545688 WNK1Q9H4A3 2382 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 ANKRD36A6QL64 1941 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 SYNJ2BP-COX16A0A087WUM0 186 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 VSTM2BA6NLU5 285 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 POLR2DO15514 142 aaKnown RBP2.25□□□□□ -2.05
SNHG1-224ENST00000545688 CALUO43852 315 aaPredicted RBP2.25□□□□□ -2.05
SNHG1-224ENST00000545688 STX10O60499 249 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 B4GALT2O60909 372 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 ATP6V1B2P21281 511 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 CALB2P22676 271 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 GPR1P46091 355 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 SULT1E1P49888 294 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 KPNA2P52292 529 aaKnown RBP2.25□□□□□ -2.05
SNHG1-224ENST00000545688 SLC26A5P58743 744 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 AP1S1P61966 158 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 ARL6IP1Q15041 203 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 PARP15Q460N3 678 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 HENMT1Q5T8I9 393 aaKnown RBP2.25□□□□□ -2.05
SNHG1-224ENST00000545688 Q6ZR03 302 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 FAM92BQ6ZTR7 304 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 STRADAQ7RTN6 431 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 LRRC75A-AS1Q8N1F1 130 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 SPC24Q8NBT2 197 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 OR11G2Q8NGC1 345 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 FANK1Q8TC84 345 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 BRSK1Q8TDC3 778 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 PAGE5Q96GU1 130 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 TIMM29Q9BSF4 260 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 UCK2Q9BZX2 261 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 IFI27L2Q9H2X8 130 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 CDC42EP4Q9H3Q1 356 aaKnown RBP2.25□□□□□ -2.05
SNHG1-224ENST00000545688 RHOJQ9H4E5 214 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 SUDS3Q9H7L9 328 aaPredicted RBP2.25□□□□□ -2.05
SNHG1-224ENST00000545688 WDR54Q9H977 334 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 COX16Q9P0S2 106 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 ATXN10Q9UBB4 475 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 MARCOQ9UEW3 520 aaPredicted RBP2.25□□□□□ -2.05
SNHG1-224ENST00000545688 ATP6V1HQ9UI12 483 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 STAP1Q9ULZ2 295 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 HPCAL4Q9UM19 191 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 FOXJ3Q9UPW0 622 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 YTHDF2Q9Y5A9 579 aaKnown RBP2.25□□□□□ -2.05
SNHG1-224ENST00000545688 SACSQ9NZJ4 4579 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 DNAJC13O75165 2243 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 USF3Q68DE3 2245 aa2.25□□□□□ -2.05
SNHG1-224ENST00000545688 MPDZO75970 2070 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 CHD3Q12873 2000 aaKnown RBP2.24□□□□□ -2.05
SNHG1-224ENST00000545688 CCDC88CQ9P219 2028 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 IGLV3-12A0A075B6K2 115 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 A0A0G2JLM5 398 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 A0A0G2JN53 185 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 A0A0J9YYE9 177 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 RGSL1A5PLK6 1076 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 OR52A4PA6NMU1 304 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 C9J4A7 227 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 H3BQV1 296 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 CETN3O15182 167 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 MED7O43513 233 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 ALOX12BO75342 701 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 TRBC1P01850 177 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 RHOXF2BP0C7M4 288 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 ZNF7P17097 686 aaPredicted RBP2.24□□□□□ -2.05
SNHG1-224ENST00000545688 CELP19835 753 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 SPINT3P49223 89 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 DCDP81605 110 aaKnown RBP2.24□□□□□ -2.05
SNHG1-224ENST00000545688 SLC5A12Q1EHB4 618 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 FBXL19-AS1Q494R0 122 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 NKAIN1Q4KMZ8 207 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 RESP18Q5W5W9 173 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 LRRC66Q68CR7 880 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 RAET1GQ6H3X3 334 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 H3F3CQ6NXT2 135 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 GDPD3Q7L5L3 318 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 C16orf62Q7Z3J2 963 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 OR5AU1Q8NGC0 362 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 DTX3LQ8TDB6 740 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 CA5BP1Q8WTZ4 195 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 PINX1Q96BK5 328 aaKnown RBP2.24□□□□□ -2.05
SNHG1-224ENST00000545688 TBC1D31Q96DN5 1066 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 CNDP1Q96KN2 507 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 HIST1H4GQ99525 98 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 RIOK2Q9BVS4 552 aaKnown RBP2.24□□□□□ -2.05
SNHG1-224ENST00000545688 XPO4Q9C0E2 1151 aaKnown RBP2.24□□□□□ -2.05
SNHG1-224ENST00000545688 NAT10Q9H0A0 1025 aaKnown RBP2.24□□□□□ -2.05
SNHG1-224ENST00000545688 MRM3Q9HC36 420 aaKnown RBP2.24□□□□□ -2.05
SNHG1-224ENST00000545688 FAM60AQ9NP50 221 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 KCNJ16Q9NPI9 418 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 GPATCH2LQ9NWQ4 482 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 HRASLS2Q9NWW9 162 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 SMPD3Q9NY59 655 aaPredicted RBP2.24□□□□□ -2.05
SNHG1-224ENST00000545688 RDH8Q9NYR8 311 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 CD84Q9UIB8 345 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 SH3BGRL2Q9UJC5 107 aa2.24□□□□□ -2.05
SNHG1-224ENST00000545688 V9GY05 133 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms