RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 IGKV1D-43A0A0B4J1Z2 117 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 ELOVL7A1L3X0 281 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 MEIOCA2RUB1 952 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 OR6A2O95222 327 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 CCDC159P0C7I6 412 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 SAA4P35542 130 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 GABPB1Q06547 395 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 BNIP1Q12981 228 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 ZNF181Q2M3W8 571 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 CDONQ4KMG0 1287 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 C10orf111Q8N326 155 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 LSMEM1Q8N8F7 131 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 NPRL2Q8WTW4 380 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 ZNF583Q96ND8 569 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 SSX3Q99909 188 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 KCTD14Q9BQ13 255 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 CHID1Q9BWS9 393 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 RANBP3Q9H6Z4 567 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 ZNF702PQ9H963 129 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 PALMDQ9NP74 551 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 SLC13A4Q9UKG4 626 aa12.53□□□□□ -0.4
CLSTN3-216ENST00000545663 GSTA4O15217 222 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 GYG2O15488 501 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 MLNRO43193 412 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 ADAM20O43506 726 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 RNF13O43567 381 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 ANGPTL7O43827 346 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 ABHD16AO95870 558 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 T-ENOLP0DO92 83 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 PF4V1P10720 104 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 HSD17B1P14061 328 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 SRP9P49458 86 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 MRPS34P82930 218 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 LIPEQ05469 1076 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 CCDC121Q6ZUS5 278 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 CCDC80Q76M96 950 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 KRT77Q7Z794 578 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 IGFN1Q86VF2 1251 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 MICU2Q8IYU8 434 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 DEFB107AQ8IZN7 70 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 C1orf87Q8N0U7 546 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 SDR9C7Q8NEX9 313 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 NFKBIDQ8NI38 313 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 DNAJA4Q8WW22 397 aaPredicted RBP12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 DDOQ99489 341 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 EPYCQ99645 322 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 MRPL13Q9BYD1 178 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 MUC13Q9H3R2 512 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 C20orf141Q9NUB4 165 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 CMTM6Q9NX76 183 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 ONECUT1Q9UBC0 465 aa12.52□□□□□ -0.41
CLSTN3-216ENST00000545663 A0A1B0GVI7 797 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 IGHG1P01857 330 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 NUDT7P0C024 238 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 PRKAR1BP31321 381 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 GZMMP51124 257 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 SELPLGQ14242 412 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 OR2T2Q6IF00 324 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 ULK3Q6PHR2 472 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 RANBP3LQ86VV4 465 aaPredicted RBP12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 BOLLQ8N9W6 283 aaKnown RBP12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 SLC26A7Q8TE54 656 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 LZICQ8WZA0 190 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 NSMAFQ92636 917 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 MAL2Q969L2 176 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 CDRT15Q96T59 188 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 BTBD10Q9BSF8 475 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 TAS2R1Q9NYW7 299 aa12.51□□□□□ -0.41
CLSTN3-216ENST00000545663 NME4O00746 187 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 ZFPL1O95159 310 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 PF4P02776 101 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 HLA-DPB1P04440 258 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 EEF1B2P24534 225 aaKnown RBP12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 LAP3P28838 519 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 GSK3BP49841 420 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 FMODQ06828 376 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 POU4F2Q12837 409 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 CLEC12AQ5QGZ9 265 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 DHRS4L2Q6PKH6 230 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 ARMC8Q8IUR7 673 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 ALDH16A1Q8IZ83 802 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 NPEPL1Q8NDH3 523 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 BEND2Q8NDZ0 799 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 NOXO1Q8NFA2 376 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 OR13G1Q8NGZ3 307 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 WFDC6Q9BQY6 131 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 NPFFR1Q9GZQ6 430 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 UFSP2Q9NUQ7 469 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 TBCCD1Q9NVR7 557 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 MAGEL2Q9UJ55 1249 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 BAG5Q9UL15 447 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 KPTNQ9Y664 436 aa12.5□□□□□ -0.41
CLSTN3-216ENST00000545663 RBMY1BA6NDE4 496 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 RBMY1EA6NEQ0 496 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 DVL1O14640 695 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 FAM20BO75063 409 aa12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 TRMUO75648 421 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 DUS4LO95620 317 aaKnown RBP12.49□□□□□ -0.41
CLSTN3-216ENST00000545663 RBMY1DP0C7P1 496 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms