RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 LOXP28300 417 aaPredicted RBP11.22□□□□□ -0.61
CDCA3-210ENST00000545368 MMP16P51512 607 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 GBX2P52951 348 aaPredicted RBP11.22□□□□□ -0.61
CDCA3-210ENST00000545368 WNT4P56705 351 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 MALLQ13021 153 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 OR2G6Q5TZ20 316 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 RFPL4BQ6ZWI9 263 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 FAM57BQ71RH2 274 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 ZNF101Q8IZC7 436 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 SVOPQ8N4V2 548 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 OR52H1Q8NGJ2 320 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 OR1J1Q8NGS3 322 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 SPRYD4Q8WW59 207 aaPredicted RBP11.22□□□□□ -0.61
CDCA3-210ENST00000545368 NR1H4Q96RI1 486 aaPredicted RBP11.22□□□□□ -0.61
CDCA3-210ENST00000545368 ZNF649Q9BS31 505 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 OR10A2Q9H208 303 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 ISG20L2Q9H9L3 353 aaKnown RBP11.22□□□□□ -0.61
CDCA3-210ENST00000545368 TUBG2Q9NRH3 451 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 FAM206AQ9NX38 181 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 CLEC2DQ9UHP7 191 aa11.22□□□□□ -0.61
CDCA3-210ENST00000545368 PKDREJQ9NTG1 2253 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 ADGRG4Q8IZF6 3080 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 XRCC2O43543 280 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 GLRXP35754 106 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 PSMB10P40306 273 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 TAS2R43P59537 309 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 PPP1CBP62140 327 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 NKX6-1P78426 367 aaPredicted RBP11.21□□□□□ -0.61
CDCA3-210ENST00000545368 MFGE8Q08431 387 aaPredicted RBP11.21□□□□□ -0.61
CDCA3-210ENST00000545368 TBCEQ15813 527 aaPredicted RBP11.21□□□□□ -0.61
CDCA3-210ENST00000545368 ZNF672Q499Z4 452 aaPredicted RBP11.21□□□□□ -0.61
CDCA3-210ENST00000545368 BCL2L15Q5TBC7 163 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 RGS7BPQ6MZT1 257 aaPredicted RBP11.21□□□□□ -0.61
CDCA3-210ENST00000545368 ZNF773Q6PK81 442 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 VHLLQ6RSH7 139 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 COLCA1Q6ZS62 124 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 NAA40Q86UY6 237 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 TMEM200AQ86VY9 491 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 NANOGP1Q8N7R0 232 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 C14orf79Q96F83 325 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 PELI1Q96FA3 418 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 SIGLEC11Q96RL6 698 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 ZNF442Q9H7R0 627 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 TRIM36Q9NQ86 728 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 CA10Q9NS85 328 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 PTTG3PQ9NZH4 202 aa11.21□□□□□ -0.61
CDCA3-210ENST00000545368 CADP27708 2225 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 FAM221AA4D161 298 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 H3BSA7 217 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 GPRIN2O60269 458 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 SRSF10O75494 262 aaKnown RBP11.2□□□□□ -0.62
CDCA3-210ENST00000545368 CTAG2O75638 210 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 ATE1O95260 518 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 PLAUP00749 431 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 NGFP01138 241 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 GCH1P30793 250 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 SSTR2P30874 369 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 TLE4Q04727 773 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 IRF3Q14653 427 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 TIGD6Q17RP2 521 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 GFOD2Q3B7J2 385 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 SNAI3Q3KNW1 292 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 ZNF718Q3SXZ3 478 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 SPATA46Q5T0L3 261 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 MRPL21Q7Z2W9 205 aaKnown RBP11.2□□□□□ -0.62
CDCA3-210ENST00000545368 KLBQ86Z14 1044 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 OR8B12Q8NGG6 310 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 SLC25A40Q8TBP6 338 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 GATAD2BQ8WXI9 593 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 AKAP1Q92667 903 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDCA3-210ENST00000545368 RORBQ92753 470 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 FBXW5Q969U6 566 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 MARVELD3Q96A59 401 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 PBOV1Q9GZY1 135 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 CLEC4MQ9H2X3 399 aaPredicted RBP11.2□□□□□ -0.62
CDCA3-210ENST00000545368 OPA3Q9H6K4 179 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 ZNF696Q9H7X3 374 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 BABAM2Q9NXR7 383 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 CISD1Q9NZ45 108 aaKnown RBP11.2□□□□□ -0.62
CDCA3-210ENST00000545368 NUFIP1Q9UHK0 495 aaKnown RBP11.2□□□□□ -0.62
CDCA3-210ENST00000545368 ZNF391Q9UJN7 358 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 OR52A1Q9UKL2 312 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 STARD10Q9Y365 291 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 CMAHPQ9Y471 501 aa11.2□□□□□ -0.62
CDCA3-210ENST00000545368 COL12A1Q99715 3063 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 HS3ST1O14792 307 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 PNPP00491 289 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 CFL1P23528 166 aaKnown RBP11.19□□□□□ -0.62
CDCA3-210ENST00000545368 THBS4P35443 961 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 TGM4P49221 684 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 CDH15P55291 814 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 SELENOVP59797 346 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 ERVS71-1P61550 626 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 ALKBH1Q13686 389 aaKnown RBP11.19□□□□□ -0.62
CDCA3-210ENST00000545368 SPHARQ15513 63 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 MED22Q15528 200 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 CCDC58Q4VC31 144 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 GLYATL3Q5SZD4 288 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 FDX2Q6P4F2 183 aa11.19□□□□□ -0.62
CDCA3-210ENST00000545368 PRSS45Q7RTY3 260 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms