RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 ARL9Q6T311 187 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 SLC22A25Q6T423 547 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 UNQ6126/PRO20091Q6UXV3 157 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 ZNF704Q6ZNC4 412 aaPredicted RBP11.28□□□□□ -0.6
DDX11-227ENST00000544652 ZNF283Q8N7M2 679 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 NANOGP1Q8N7R0 232 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 KBTBD8Q8NFY9 601 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 OR52N1Q8NH53 320 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 APOBEC3DQ96AK3 386 aaPredicted RBP11.28□□□□□ -0.6
DDX11-227ENST00000544652 PELI1Q96FA3 418 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 C4orf36Q96KX1 117 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 BCL2L14Q9BZR8 327 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 ZNF442Q9H7R0 627 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 ISG20L2Q9H9L3 353 aaKnown RBP11.28□□□□□ -0.6
DDX11-227ENST00000544652 TUBG2Q9NRH3 451 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 FAM206AQ9NX38 181 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 EIF3KQ9UBQ5 218 aaKnown RBP11.28□□□□□ -0.6
DDX11-227ENST00000544652 CLEC2DQ9UHP7 191 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 GRIP1Q9Y3R0 1128 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 SPEF1Q9Y4P9 236 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 ARFGEF3Q5TH69 2177 aa11.28□□□□□ -0.6
DDX11-227ENST00000544652 GCN1Q92616 2671 aaKnown RBP11.28□□□□□ -0.6
DDX11-227ENST00000544652 NGFP01138 241 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 TACSTD2P09758 323 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 ANOS1P23352 680 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 CHN2P52757 468 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 ZNF121P58317 390 aaPredicted RBP11.27□□□□□ -0.61
DDX11-227ENST00000544652 TLE4Q04727 773 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 MRPL28Q13084 256 aaKnown RBP11.27□□□□□ -0.61
DDX11-227ENST00000544652 ZNF829Q3KNS6 432 aaPredicted RBP11.27□□□□□ -0.61
DDX11-227ENST00000544652 OR2G6Q5TZ20 316 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 RFPL4BQ6ZWI9 263 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 FAM220AQ7Z4H9 259 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 KLHL36Q8N4N3 616 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 YIPF7Q8N8F6 280 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 HAVCR2Q8TDQ0 301 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 SPRYD4Q8WW59 207 aaPredicted RBP11.27□□□□□ -0.61
DDX11-227ENST00000544652 RORBQ92753 470 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 COG8Q96MW5 612 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 MOB1AQ9H8S9 216 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 SP140LQ9H930 580 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 ACOXLQ9NUZ1 547 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 CHCHD3Q9NX63 227 aaKnown RBP11.27□□□□□ -0.61
DDX11-227ENST00000544652 GNG8Q9UK08 70 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 R4GMQ9 66 aa11.27□□□□□ -0.61
DDX11-227ENST00000544652 TMEM269A0A1B0GVZ9 245 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 E7EQL1 145 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 H3BSA7 217 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 J3QLW9 94 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 IGLV3-1P01715 115 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 MT-ND2P03891 347 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 FAM157BP0CG42 384 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 ZNF19P17023 458 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 SLC6A9P48067 706 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 MFGE8Q08431 387 aaPredicted RBP11.26□□□□□ -0.61
DDX11-227ENST00000544652 SNTB2Q13425 540 aaKnown RBP11.26□□□□□ -0.61
DDX11-227ENST00000544652 SNAI3Q3KNW1 292 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 ZNF672Q499Z4 452 aaPredicted RBP11.26□□□□□ -0.61
DDX11-227ENST00000544652 TMPRSS11AQ6ZMR5 421 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 OR52H1Q8NGJ2 320 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 OR1J1Q8NGS3 322 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 ABHD4Q8TB40 342 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 TMEM171Q8WVE6 324 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 MARS2Q96GW9 593 aaKnown RBP11.26□□□□□ -0.61
DDX11-227ENST00000544652 DMRTB1Q96MA1 342 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 NR1H4Q96RI1 486 aaPredicted RBP11.26□□□□□ -0.61
DDX11-227ENST00000544652 G6PC2Q9NQR9 355 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 CA10Q9NS85 328 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 ZNF319Q9P2F9 582 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 NUFIP1Q9UHK0 495 aaKnown RBP11.26□□□□□ -0.61
DDX11-227ENST00000544652 ERGIC3Q9Y282 383 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 LSM2Q9Y333 95 aaKnown RBP11.26□□□□□ -0.61
DDX11-227ENST00000544652 STARD10Q9Y365 291 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 SNX5Q9Y5X3 404 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 TANC2Q9HCD6 1990 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 PLCE1Q9P212 2302 aa11.26□□□□□ -0.61
DDX11-227ENST00000544652 C5orf63A6NC05 138 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 MYL12BO14950 172 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 GPRIN2O60269 458 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 TNFAIP8O95379 198 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 MT-ND5P03915 603 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 LCATP04180 440 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 ANXA2P07355 339 aaKnown RBP11.25□□□□□ -0.61
DDX11-227ENST00000544652 SLC2A1P11166 492 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 ZNF250P15622 560 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 EEF1B2P24534 225 aaKnown RBP11.25□□□□□ -0.61
DDX11-227ENST00000544652 THBS4P35443 961 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 TGM4P49221 684 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 CCR9P51686 369 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 WNT4P56705 351 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 ERVS71-1P61550 626 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 PPP1CBP62140 327 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 RPS23P62266 143 aaKnown RBP11.25□□□□□ -0.61
DDX11-227ENST00000544652 ACSM1Q08AH1 577 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 TBCEQ15813 527 aaPredicted RBP11.25□□□□□ -0.61
DDX11-227ENST00000544652 MSMPQ1L6U9 139 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 CATSPERDQ86XM0 798 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 OR8B12Q8NGG6 310 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 OR5L1Q8NGL2 311 aa11.25□□□□□ -0.61
DDX11-227ENST00000544652 SLC25A40Q8TBP6 338 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms