RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TAF11Q15544 211 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 AANATQ16613 207 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 SMU1Q2TAY7 513 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 MS4A18Q3C1V0 323 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 CDONQ4KMG0 1287 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 SPRNQ5BIV9 151 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 PABPC1L2AQ5JQF8 200 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 ACSM6Q6P461 480 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 TNFAIP8L2Q6P589 184 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-220ENST00000544550 CRIP3Q6Q6R5 217 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF841Q6ZN19 808 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 VMO1Q7Z5L0 202 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 COMTD1Q86VU5 262 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF101Q8IZC7 436 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 TRIML2Q8N7C3 387 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 BEND2Q8NDZ0 799 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 OR4K5Q8NGD3 323 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 OR4A15Q8NGL6 344 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 OR11L1Q8NGX0 322 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 OR6X1Q8NH79 312 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 C8orf46Q8TAG6 207 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 SLC7A13Q8TCU3 470 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 TMEM54Q969K7 222 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 SLC35B4Q969S0 331 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 ERGIC1Q969X5 290 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 RBMXL1Q96E39 390 aaKnown RBP3.32□□□□□ -1.88
SNHG1-220ENST00000544550 SLC41A3Q96GZ6 507 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 SLC25A44Q96H78 314 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-220ENST00000544550 POM121L2Q96KW2 1035 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 ZNF583Q96ND8 569 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 PAFAH2Q99487 392 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 ERP44Q9BS26 406 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 DCTN5Q9BTE1 182 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 RAB17Q9H0T7 212 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 SIRPDQ9H106 197 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 SLC38A1Q9H2H9 487 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 DPH5Q9H2P9 285 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 MMADHCQ9H3L0 296 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-220ENST00000544550 SEPSECSQ9HD40 501 aaKnown RBP3.32□□□□□ -1.88
SNHG1-220ENST00000544550 GAR1Q9NY12 217 aaKnown RBP3.32□□□□□ -1.88
SNHG1-220ENST00000544550 MRPL39Q9NYK5 338 aaKnown RBP3.32□□□□□ -1.88
SNHG1-220ENST00000544550 CALML5Q9NZT1 146 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 SELENONQ9NZV5 590 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 NDUFAF4Q9P032 175 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 TMEM216Q9P0N5 145 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 RPS6KB2Q9UBS0 482 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 UTP11Q9Y3A2 253 aaKnown RBP3.32□□□□□ -1.88
SNHG1-220ENST00000544550 TENM3Q9P273 2699 aa3.32□□□□□ -1.88
SNHG1-220ENST00000544550 HYDINQ4G0P3 5121 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 ELOVL7A1L3X0 281 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 MEIOCA2RUB1 952 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 GMNCA6NCL1 334 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 FAM90A20PA6NIJ5 464 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 CENPBD1B2RD01 187 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 H3BUX3 64 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 HMGN4O00479 90 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 AZIN1O14977 448 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 NPFFO15130 113 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 MT-ATP6P00846 226 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 LHBP01229 141 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 IGHG1P01857 330 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 MBPP02686 304 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 MMP7P09237 267 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 LINC00032P0C843 101 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 NR2F1P10589 423 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 MYL2P10916 166 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 NR2C1P13056 603 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 HLA-DOBP13765 273 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 NDUFB7P17568 137 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 KRT4P19013 534 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 CHATP28329 748 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 CHI3L1P36222 383 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 PLTPP55058 493 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 PCBD1P61457 104 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 ARF6P62330 175 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 SF3A3Q12874 501 aaKnown RBP eCLIP3.31□□□□□ -1.886e-19■■■□□ 14.9
SNHG1-220ENST00000544550 MAD2L1Q13257 205 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 PTGR1Q14914 329 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 SYPL1Q16563 259 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 LRRC75BQ2VPJ9 315 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 TCTEX1D4Q5JR98 221 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 TMEM255AQ5JRV8 349 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 INTS11Q5TA45 600 aaKnown RBP3.31□□□□□ -1.88
SNHG1-220ENST00000544550 ANXA8L1Q5VT79 327 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 NCR3LG1Q68D85 454 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 ZCCHC23Q6ZST2 131 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 RFPL4BQ6ZWI9 263 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 BTN2A1Q7KYR7 527 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 HDDC2Q7Z4H3 204 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 HMGN2P46Q86SG4 172 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 ANKRD46Q86W74 232 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 PDZD9Q8IXQ8 264 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 Q8N2B8 174 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 LRRC18Q8N456 261 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 SPC24Q8NBT2 197 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 OR51D1Q8NGF3 324 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 OR8J2Q8NGG1 315 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 OR51G2Q8NGK0 314 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 OR13G1Q8NGZ3 307 aa3.31□□□□□ -1.88
SNHG1-220ENST00000544550 OR2T11Q8NH01 316 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms