RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 M0R233 179 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 RER1O15258 196 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 CFDP00746 253 aaPredicted RBP15.95■□□□□ 0.14
VIM-209ENST00000544301 AMY2AP04746 511 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 ZNF735P0CB33 412 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 ENPP1P22413 925 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 TRA2AQ13595 282 aaKnown RBP eCLIP15.95■□□□□ 0.14
VIM-209ENST00000544301 OPCMLQ14982 345 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 C4orf46Q504U0 113 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 ESCO2Q56NI9 601 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 M1APQ8TC57 530 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 FAM46BQ96A09 425 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 ELMOD3Q96FG2 381 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 SLC25A21Q9BQT8 299 aaPredicted RBP15.95■□□□□ 0.14
VIM-209ENST00000544301 ANGPTL4Q9BY76 406 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 OPN4Q9UHM6 478 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 MED12Q93074 2177 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 C9J4A7 227 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 GOSR2O14653 212 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 PMS2P2O95744 297 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 VSIG8P0DPA2 414 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 CCL3P10147 92 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 SLC2A1P11166 492 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 ZNF20P17024 532 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 CLDN17P56750 224 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 ZNF121P58317 390 aaPredicted RBP15.95■□□□□ 0.14
VIM-209ENST00000544301 MC2RQ01718 297 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 CHMP1BQ7LBR1 199 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 OR8B12Q8NGG6 310 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 CMBLQ96DG6 245 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 PROK2Q9HC23 129 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 UBQLN2Q9UHD9 624 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 COLQQ9Y215 455 aaPredicted RBP15.95■□□□□ 0.14
VIM-209ENST00000544301 SLC5A6Q9Y289 635 aa15.95■□□□□ 0.14
VIM-209ENST00000544301 TMEM82A0PJX8 343 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 ANOS1P23352 680 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 NFYAP23511 347 aaPredicted RBP15.94■□□□□ 0.14
VIM-209ENST00000544301 DUSP3P51452 185 aaPredicted RBP15.94■□□□□ 0.14
VIM-209ENST00000544301 H3F3AP84243 136 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 OC90Q02509 493 aaPredicted RBP15.94■□□□□ 0.14
VIM-209ENST00000544301 FJX1Q86VR8 437 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 TNFAIP8L1Q8WVP5 186 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 GNRHR2Q96P88 292 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 SOX7Q9BT81 388 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 ZNF319Q9P2F9 582 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 AUP1Q9Y679 476 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 RPS10-NUDT3A0A1W2PQS6 291 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 MCRIP1C9JLW8 97 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 TLX3O43711 291 aaPredicted RBP15.94■□□□□ 0.14
VIM-209ENST00000544301 ZNF35P13682 527 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 LIFP15018 202 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 ABOP16442 354 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 C4BPBP20851 252 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 SSR4P51571 173 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 POU4F3Q15319 338 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 CDNFQ49AH0 187 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 ABHD12BQ7Z5M8 362 aaPredicted RBP15.94■□□□□ 0.14
VIM-209ENST00000544301 ZNF584Q8IVC4 421 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 BPIFB2Q8N4F0 458 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 CCDC107Q8WV48 283 aa15.94■□□□□ 0.14
VIM-209ENST00000544301 F5H5P2 479 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 L7N2F9 121 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 ERCC1P07992 297 aaPredicted RBP15.93■□□□□ 0.14
VIM-209ENST00000544301 OR4E1P0C645 316 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 ZNF93P35789 620 aaPredicted RBP15.93■□□□□ 0.14
VIM-209ENST00000544301 CX3CR1P49238 355 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 P2RX3P56373 397 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 MPPED2Q15777 294 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 DCAF12L2Q5VW00 463 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 RNF144BQ7Z419 303 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 COMMD2Q86X83 199 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 CHST4Q8NCG5 386 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 OR4S1Q8NGB4 309 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 OR2Y1Q8NGV0 311 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 NTNG2Q96CW9 530 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 SLC6A7Q99884 636 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 SH2D2AQ9NP31 389 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 GPR84Q9NQS5 396 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 GLTPQ9NZD2 209 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 FBLN5Q9UBX5 448 aa15.93■□□□□ 0.14
VIM-209ENST00000544301 FARSAQ9Y285 508 aaKnown RBP15.93■□□□□ 0.14
VIM-209ENST00000544301 LAMTOR5O43504 91 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 ZIC3O60481 467 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 SNAPC5O75971 98 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 DSCR4P56555 118 aaPredicted RBP15.92■□□□□ 0.14
VIM-209ENST00000544301 CLLU1Q5K131 121 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 TRAPPC6BQ86SZ2 158 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 ANGPTL5Q86XS5 388 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 MAML2Q8IZL2 1156 aaPredicted RBP15.92■□□□□ 0.14
VIM-209ENST00000544301 OR5AS1Q8N127 324 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 PAQR8Q8TEZ7 354 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 EDEM2Q9BV94 578 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 MYOZ1Q9NP98 299 aaPredicted RBP15.92■□□□□ 0.14
VIM-209ENST00000544301 MAB21L2Q9Y586 359 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 TMEM14DPA8MWL7 114 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 G3V3Y1 287 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 H3BUI4 141 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 CER1O95813 267 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 ZNF17P17021 662 aa15.92■□□□□ 0.14
VIM-209ENST00000544301 SEC61A1P61619 476 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms