RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 FOLR2P14207 255 aa13.4□□□□□ -0.26
CHFR-223ENST00000544268 EMP2P54851 167 aa13.4□□□□□ -0.26
CHFR-223ENST00000544268 INSM1Q01101 510 aaPredicted RBP13.4□□□□□ -0.26
CHFR-223ENST00000544268 CSRP2Q16527 193 aa13.4□□□□□ -0.26
CHFR-223ENST00000544268 MRPL14Q6P1L8 145 aaKnown RBP13.4□□□□□ -0.26
CHFR-223ENST00000544268 PHYHIPLQ96FC7 376 aa13.4□□□□□ -0.26
CHFR-223ENST00000544268 FAM117AQ9C073 453 aa13.4□□□□□ -0.26
CHFR-223ENST00000544268 ZNF629Q9UEG4 869 aaPredicted RBP13.4□□□□□ -0.26
CHFR-223ENST00000544268 GTF2A1LQ9UNN4 478 aa13.4□□□□□ -0.26
CHFR-223ENST00000544268 FOXJ3Q9UPW0 622 aa13.4□□□□□ -0.26
CHFR-223ENST00000544268 FRG2CA6NGY1 282 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 GOSR2O14653 212 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 HLA-DQA2P01906 255 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 PNMTP11086 282 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 HLA-DOBP13765 273 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 PRF1P14222 555 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 SORDQ00796 357 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 TCF15Q12870 199 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 PDZK1IP1Q13113 114 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 DCAF12L2Q5VW00 463 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 GPR119Q8TDV5 335 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 METTL21AQ8WXB1 218 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 SLC26A1Q9H2B4 701 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 PARD6AQ9NPB6 346 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 B3GALT1Q9Y5Z6 326 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 PCNX2A6NKB5 2137 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 PYCARD-AS1I3L0S3 204 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 ZNF354AO60765 605 aaPredicted RBP13.39□□□□□ -0.27
CHFR-223ENST00000544268 PNPP00491 289 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 ADH7P40394 386 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 KIR3DL2P43630 455 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 RIDAP52758 137 aaKnown RBP13.39□□□□□ -0.27
CHFR-223ENST00000544268 PPIAP62937 165 aaKnown RBP13.39□□□□□ -0.27
CHFR-223ENST00000544268 GABREP78334 506 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 C3orf33Q6P1S2 294 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 OR2W3Q7Z3T1 314 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 LRRTM1Q86UE6 522 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 OR2G2Q8NGZ5 317 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 TMEM106AQ96A25 262 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 LRFN5Q96NI6 719 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 WWTR1Q9GZV5 400 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 TCF7L1Q9HCS4 588 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 TAS2R10Q9NYW0 307 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 PCDHB10Q9UN67 800 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 LOXL2Q9Y4K0 774 aa13.39□□□□□ -0.27
CHFR-223ENST00000544268 KNTC1P50748 2209 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 OR4C45A6NMZ5 311 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 B4E171 279 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 GPRIN2O60269 458 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 FBP1P09467 338 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 ALOX5APP20292 161 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 AGTR1P30556 359 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 P2RX1P51575 399 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 BLOC1S1P78537 153 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 MRPS10P82664 201 aaKnown RBP13.38□□□□□ -0.27
CHFR-223ENST00000544268 HABP2Q14520 560 aaPredicted RBP13.38□□□□□ -0.27
CHFR-223ENST00000544268 RNF212Q495C1 297 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 Q499Y3 187 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 TMEM69Q5SWH9 247 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 ASPHD2Q6ICH7 369 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 ZNF546Q86UE3 836 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 SLC43A2Q8N370 569 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 MR1Q95460 341 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 C8orf44Q96CB5 159 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 ADAM19Q9H013 955 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 CNTRLQ7Z7A1 2325 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 TO15178 435 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 BGLAPP02818 100 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 KLK3P07288 261 aaPredicted RBP13.38□□□□□ -0.27
CHFR-223ENST00000544268 IL12BP29460 328 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 SLC25A1P53007 311 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 GUCA2AQ02747 115 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 SMCO1Q147U7 214 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 WDR38Q5JTN6 314 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 HLA-DQA1Q5Y7H0 255 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 H3F3CQ6NXT2 135 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 SLC29A4Q7RTT9 530 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 FAM220AQ7Z4H9 259 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 ZNF676Q8N7Q3 588 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 APCDD1LQ8NCL9 501 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 NFAM1Q8NET5 270 aaPredicted RBP13.38□□□□□ -0.27
CHFR-223ENST00000544268 OR1S2Q8NGQ3 325 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 WDR77Q9BQA1 342 aaPredicted RBP13.38□□□□□ -0.27
CHFR-223ENST00000544268 LRFN3Q9BTN0 628 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 RNF122Q9H9V4 155 aa13.38□□□□□ -0.27
CHFR-223ENST00000544268 KANTRA0A1W2PQU2 76 aa13.37□□□□□ -0.27
CHFR-223ENST00000544268 TMEM200CA6NKL6 621 aa13.37□□□□□ -0.27
CHFR-223ENST00000544268 SHISA8B8ZZ34 492 aa13.37□□□□□ -0.27
CHFR-223ENST00000544268 CXCR1P25024 350 aa13.37□□□□□ -0.27
CHFR-223ENST00000544268 ABCD3P28288 659 aa13.37□□□□□ -0.27
CHFR-223ENST00000544268 BDKRB2P30411 391 aa13.37□□□□□ -0.27
CHFR-223ENST00000544268 GPX4P36969 197 aaPredicted RBP13.37□□□□□ -0.27
CHFR-223ENST00000544268 PLCXD2Q0VAA5 305 aa13.37□□□□□ -0.27
CHFR-223ENST00000544268 ACKR1Q16570 336 aa13.37□□□□□ -0.27
CHFR-223ENST00000544268 ISXQ2M1V0 245 aa13.37□□□□□ -0.27
CHFR-223ENST00000544268 PAPD4Q6PIY7 484 aaKnown RBP13.37□□□□□ -0.27
CHFR-223ENST00000544268 DND1Q8IYX4 353 aaKnown RBP13.37□□□□□ -0.27
CHFR-223ENST00000544268 KCNRGQ8N5I3 272 aa13.37□□□□□ -0.27
CHFR-223ENST00000544268 BOLLQ8N9W6 283 aaKnown RBP13.37□□□□□ -0.27
CHFR-223ENST00000544268 PRSS33Q8NF86 280 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms