RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ZNF84P51523 738 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 DEFA1P59665 94 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 DEFA3P59666 94 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 PSMA6P60900 246 aaKnown RBP11.99□□□□□ -0.49
HCFC2-202ENST00000544223 MRPL28Q13084 256 aaKnown RBP11.99□□□□□ -0.49
HCFC2-202ENST00000544223 C2orf76Q3KRA6 126 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 FAAP20Q6NZ36 180 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 EGFL6Q8IUX8 553 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 MEIOBQ8N635 442 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 OR4D6Q8NGJ1 314 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 ITFG2Q969R8 447 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 RFT1Q96AA3 541 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 FOXB1Q99853 325 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF275Q9NSD4 429 aaPredicted RBP11.99□□□□□ -0.49
HCFC2-202ENST00000544223 NLKQ9UBE8 527 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 KLK11Q9UBX7 282 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 PRSS50Q9UI38 385 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 PTPRQQ9UMZ3 2332 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 PTTG1O95997 202 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF24P17028 368 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 CCNOP22674 350 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 FAPQ12884 760 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 KCNMB1Q16558 191 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF813Q6ZN06 617 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 SLC22A24Q8N4F4 322 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 OR5D18Q8NGL1 313 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 WDYHV1Q96HA8 205 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 RNF170Q96K19 258 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 TAAR6Q96RI8 345 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 PRRX2Q99811 253 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 SCNM1Q9BWG6 230 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 ABRACLQ9P1F3 81 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 ADAM30Q9UKF2 790 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 ITPR1Q14643 2758 aa11.99□□□□□ -0.49
HCFC2-202ENST00000544223 A0A1W2PR80 420 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 A8MV72 311 aaPredicted RBP11.98□□□□□ -0.49
HCFC2-202ENST00000544223 SYNGR4O95473 234 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 HLA-HP01893 362 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 APOA1P02647 267 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 CD2P06729 351 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 DDOSTP39656 456 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 INPP1P49441 399 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 PSG4Q00888 419 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 UBE2NLQ5JXB2 153 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 DEGS2Q6QHC5 323 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 NAXEQ8NCW5 288 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 GJC3Q8NFK1 279 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 TRIM63Q969Q1 353 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 PGAM5Q96HS1 289 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 COL12A1Q99715 3063 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 NBASA2RRP1 2371 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 PCNX1Q96RV3 2341 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 ISG15P05161 165 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 IGFBP3P17936 291 aaPredicted RBP11.98□□□□□ -0.49
HCFC2-202ENST00000544223 EIF2S3P41091 472 aaKnown RBP11.98□□□□□ -0.49
HCFC2-202ENST00000544223 RANBP1P43487 201 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 ARF1P84077 181 aaKnown RBP11.98□□□□□ -0.49
HCFC2-202ENST00000544223 NHLH1Q02575 133 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 RTP5Q14D33 572 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 FAM27BQ5VT28 67 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 ZNF704Q6ZNC4 412 aaPredicted RBP11.98□□□□□ -0.49
HCFC2-202ENST00000544223 CHMP1BQ7LBR1 199 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 TMEM178AQ8NBL3 297 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 PHYHIPQ92561 330 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 PNPLA2Q96AD5 504 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 FAM3DQ96BQ1 224 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 KCNJ15Q99712 375 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 SP140LQ9H930 580 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 NOX3Q9HBY0 568 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 STEAP1Q9UHE8 339 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 NUFIP1Q9UHK0 495 aaKnown RBP11.98□□□□□ -0.49
HCFC2-202ENST00000544223 MCTS1Q9ULC4 181 aaKnown RBP11.98□□□□□ -0.49
HCFC2-202ENST00000544223 SPTA1P02549 2419 aa11.98□□□□□ -0.49
HCFC2-202ENST00000544223 INTS1Q8N201 2190 aaKnown RBP11.97□□□□□ -0.49
HCFC2-202ENST00000544223 A0A0B4J293 547 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 SGCEO43556 437 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 DNPH1O43598 174 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 RAF1P04049 648 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 UBCP0CG48 685 aaKnown RBP11.97□□□□□ -0.49
HCFC2-202ENST00000544223 FAHP16930 419 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 ACHEP22303 614 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 LSM6P62312 80 aaKnown RBP11.97□□□□□ -0.49
HCFC2-202ENST00000544223 MRPS34P82930 218 aaKnown RBP11.97□□□□□ -0.49
HCFC2-202ENST00000544223 GUCA2AQ02747 115 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 ELFN2Q5R3F8 820 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 TMEM244Q5VVB8 128 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 SLC16A14Q7RTX9 510 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 CPEB3Q8NE35 698 aaKnown RBP11.97□□□□□ -0.49
HCFC2-202ENST00000544223 YIPF5Q969M3 257 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 SLCO5A1Q9H2Y9 848 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 CNTD2Q9H8S5 307 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 CKLFQ9UBR5 152 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 POU2F3Q9UKI9 436 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 FOXJ3Q9UPW0 622 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 TMEM272A0A1B0GTI8 110 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 A0A1B0GVI7 797 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 HSPB2A8KAH6 182 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 M0R135 149 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 HLA-DQB1P01920 261 aa11.97□□□□□ -0.49
HCFC2-202ENST00000544223 TSC22D1Q15714 1073 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms