RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CALYQ9NYX4 217 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 CLCF1Q9UBD9 225 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 MTRF1LQ9UGC7 380 aaKnown RBP2.61□□□□□ -1.99
SCFD1-207ENST00000544052 LSM7Q9UK45 103 aaKnown RBP2.61□□□□□ -1.99
SCFD1-207ENST00000544052 SMAD5-AS1Q9Y6J3 95 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 ZFYVE26Q68DK2 2539 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 VPS37CA5D8V6 355 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-207ENST00000544052 TRDMT1O14717 391 aaKnown RBP2.61□□□□□ -1.99
SCFD1-207ENST00000544052 HAT1O14929 419 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 KLRC4O43908 158 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 H6PDO95479 791 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 KRT14P02533 472 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 CHTF8P0CG12 524 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 GABRR1P24046 479 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 CXCL12P48061 93 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 KRTAP10-12P60413 245 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 RPS15P62841 145 aaKnown RBP2.61□□□□□ -1.99
SCFD1-207ENST00000544052 ERVK-25P63136 954 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 NSDHLQ15738 373 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 LHFPL3Q86UP9 236 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 LINC00301Q8NCQ3 95 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 OR7G2Q8NG99 324 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 NEIL3Q8TAT5 605 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 SPPL2BQ8TCT7 592 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 SLC38A4Q969I6 547 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 SLC29A1Q99808 456 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 SRMSQ9H3Y6 488 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 SIAEQ9HAT2 523 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 CYP3A43Q9HB55 503 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 FANCEQ9HB96 536 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 HMGXB4Q9UGU5 601 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 SLC25A15Q9Y619 301 aa2.61□□□□□ -1.99
SCFD1-207ENST00000544052 CABIN1Q9Y6J0 2220 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 PKD1L2Q7Z442 2459 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 SMG1Q96Q15 3661 aaKnown RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 IGKV1D-13A0A0B4J2D9 117 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 USP27XA6NNY8 438 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 A8MUA0 341 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 H3BQV1 296 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 K7EQS6 105 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 CASC3O15234 703 aaKnown RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 TRAF3IP2O43734 574 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 NPIPB7O75200 414 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 MOSP00540 346 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 NPPAP01160 153 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 RETP07949 1114 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 IGKV1-13P0DP09 117 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 ZNF19P17023 458 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 TCN1P20061 433 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 HOXA6P31267 233 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 RORAP35398 523 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 NSG1P42857 185 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 TMED10P49755 219 aaKnown RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 GPX6P59796 221 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 TFAMQ00059 246 aaKnown RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 NRF1Q16656 503 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 CD302Q8IX05 232 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 STMN2Q93045 179 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 MCUR1Q96AQ8 359 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 TMEM101Q96IK0 257 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 TSNARE1Q96NA8 513 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 SH3GL1Q99961 368 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 ACBD6Q9BR61 282 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 C11orf70Q9BRQ4 267 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 SIKE1Q9BRV8 207 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 C20orf24Q9BUV8 137 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 RIOK2Q9BVS4 552 aaKnown RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 ILKAPQ9H0C8 392 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 BLZF1Q9H2G9 400 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 C8orf33Q9H7E9 229 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 IL26Q9NPH9 171 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 RBAKQ9NYW8 714 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 V9GYY5 206 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 DOCK4Q8N1I0 1966 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 CHD5Q8TDI0 1954 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 TDRD6O60522 2096 aaKnown RBP2.6□□□□□ -1.99
SCFD1-207ENST00000544052 LOC400499M0QZD8 3231 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 FREM2Q5SZK8 3169 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 DMXL2Q8TDJ6 3036 aa2.6□□□□□ -1.99
SCFD1-207ENST00000544052 LRRIQ3A6PVS8 624 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-207ENST00000544052 F8VP50 259 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 WRBO00258 174 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 CLIC3O95833 236 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 KRT6AP02538 564 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 HPNP05981 417 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 C2P06681 752 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 GIPP09681 153 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-207ENST00000544052 WARSP23381 471 aaKnown RBP2.59□□□□□ -1.99
SCFD1-207ENST00000544052 RPS5P46782 204 aaKnown RBP2.59□□□□□ -1.99
SCFD1-207ENST00000544052 TUFMP49411 452 aaKnown RBP2.59□□□□□ -1.99
SCFD1-207ENST00000544052 C21orf59P57076 290 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 KRTAP10-5P60370 271 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 MYL6P60660 151 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 GNB2P62879 340 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 XIAPP98170 497 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 SELENBP1Q13228 472 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 CYTH1Q15438 398 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 CHRNA6Q15825 494 aa2.59□□□□□ -1.99
SCFD1-207ENST00000544052 ZNF79Q15937 498 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms