RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 BTNL10A8MVZ5 291 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 A8MX80 341 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 PGRMC1O00264 195 aaKnown RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 GPAA1O43292 621 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 PLEKHA8P1O95397 391 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ETHE1O95571 254 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 SERPINA5P05154 406 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 STSP08842 583 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ACSM4P0C7M7 580 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 OCM2P0CE71 109 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 OCMP0CE72 109 aaPredicted RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 TRIM49P0CI25 452 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 TRIM49CP0CI26 452 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 HPGDP15428 266 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 TBPP20226 339 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ATP6V1B2P21281 511 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 IL2RGP31785 369 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 RPL5P46777 297 aaKnown RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ATP5J2P56134 94 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 NUP107P57740 925 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 TIMM10P62072 90 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 RPS15AP62244 130 aaKnown RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ADARB1P78563 741 aaKnown RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 KDSRQ06136 332 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 CD300CQ08708 224 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 FCHO2Q0JRZ9 810 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 TRAM2Q15035 370 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ALX1Q15699 326 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 TSC22D1Q15714 1073 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 CCL15Q16663 113 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 EXOC3L4Q17RC7 722 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 RGS21Q2M5E4 152 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 PGGHGQ32M88 737 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 CCDC58Q4VC31 144 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 KLF17Q5JT82 389 aaPredicted RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 COPS6Q7L5N1 327 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF546Q86UE3 836 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 LHFPL3Q86UP9 236 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 PPP1R27Q86WC6 154 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 SKA3Q8IX90 412 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 C12orf56Q8IXR9 622 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 PRR22Q8IZ63 422 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 RDH10Q8IZV5 341 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 PUSL1Q8N0Z8 303 aaKnown RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 OR5K2Q8NHB8 316 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 CLHC1Q8NHS4 586 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 FANK1Q8TC84 345 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 TCP10LQ8TDR4 215 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 PDCD6IPQ8WUM4 868 aaKnown RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ITLN1Q8WWA0 313 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ESR2Q92731 530 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 BORCS5Q969J3 196 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 NEIL2Q969S2 332 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ISOC2Q96AB3 205 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ECHDC3Q96DC8 303 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 FBXO17Q96EF6 278 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 MCCC1Q96RQ3 725 aaPredicted RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF184Q99676 751 aaPredicted RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ACBD6Q9BR61 282 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 RNF126Q9BV68 326 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF696Q9H7X3 374 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 MRPL47Q9HD33 250 aaKnown RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF302Q9NR11 478 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 AGPAT4Q9NRZ5 378 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 PAQR5Q9NXK6 330 aaPredicted RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 STMN3Q9NZ72 180 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 IL37Q9NZH6 218 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 KCNIP1Q9NZI2 227 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 ADA2Q9NZK5 511 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 DPM3Q9P2X0 92 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 MUTYHQ9UIF7 546 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 GNPTGQ9UJJ9 305 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 DNAJC12Q9UKB3 198 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 YARS2Q9Y2Z4 477 aaKnown RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 SNX24Q9Y343 169 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 CACNG2Q9Y698 323 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 CACNA1BQ00975 2339 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 UNC79Q9P2D8 2635 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ATAD5Q96QE3 1844 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 GLYATL1P3A0A0U1RQE8 302 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ERVV-1B6SEH8 477 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 H7C0C1 242 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 MRPS12O15235 138 aaKnown RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ACOX3O15254 700 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 PI15O43692 258 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 GATCO43716 136 aaKnown RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 SLC19A2O60779 497 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 SULT1C4O75897 302 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 SNAPINO95295 136 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 DEXIO95424 95 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 KRT7P08729 469 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 IGLL1P15814 213 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 CXCR2P25025 360 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 HOXA6P31267 233 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 NBL1P41271 181 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 AP2S1P53680 142 aaPredicted RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ACTA2P62736 377 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ACTG2P63267 376 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ACTC1P68032 377 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ACTA1P68133 377 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms