RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 LRTOMTQ8WZ04 291 aa13.09□□□□□ -0.31
ECHDC2-223ENST00000542552 INTS14Q96SY0 518 aa13.09□□□□□ -0.31
ECHDC2-223ENST00000542552 OR51V1Q9H2C8 321 aa13.09□□□□□ -0.31
ECHDC2-223ENST00000542552 KIF17Q9P2E2 1029 aa13.09□□□□□ -0.31
ECHDC2-223ENST00000542552 IQCF6A8MYZ5 107 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 ZNF878C9JN71 531 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 LMX1BO60663 402 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 SLC2A5P22732 501 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 ANOS1P23352 680 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 TNFSF4P23510 183 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 CDH15P55291 814 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 ACTR3P61158 418 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 PTGES3Q15185 160 aaKnown RBP13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 FAM166AQ6J272 317 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 RHOUQ7L0Q8 258 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 DPY19L4Q7Z388 723 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 PRIMA1Q86XR5 153 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 ZDHHC13Q8IUH4 622 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 ERI1Q8IV48 349 aaKnown RBP13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 BBS1Q8NFJ9 593 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 OR2Z1Q8NG97 314 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 RNF133Q8WVZ7 376 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 OTULINQ96BN8 352 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 ZMYND19Q96E35 227 aaPredicted RBP13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 ZNF582Q96NG8 517 aaPredicted RBP13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 AMELYQ99218 206 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 KCNJ15Q99712 375 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 SLC30A2Q9BRI3 323 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 ABHD6Q9BV23 337 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 KRT84Q9NSB2 600 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 IL19Q9UHD0 177 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 DYSFO75923 2080 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 ATRQ13535 2644 aa13.08□□□□□ -0.32
ECHDC2-223ENST00000542552 C5orf63A6NC05 138 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 MITFO75030 526 aaPredicted RBP13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 TGFAP01135 160 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 SELEP16581 610 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 EFNB1P98172 346 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 MALLQ13021 153 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 EIF2B1Q14232 305 aaKnown RBP13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 SNAI3Q3KNW1 292 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 SLC35D3Q5M8T2 416 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 SHFQ7M4L6 423 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 OR5AS1Q8N127 324 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 OR6N2Q8NGY6 317 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 OR13G1Q8NGZ3 307 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 CCL17Q92583 94 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 CENPNQ96H22 339 aaPredicted RBP13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 PLEKHA8Q96JA3 519 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 COPS4Q9BT78 406 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 REPIN1Q9BWE0 567 aaKnown RBP13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 TEX12Q9BXU0 123 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 CENPMQ9NSP4 180 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 TVP23BQ9NYZ1 205 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 TMEFF2Q9UIK5 374 aaPredicted RBP13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
ECHDC2-223ENST00000542552 FBN1P35555 2871 aaKnown RBP13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 ZAR1LA6NP61 321 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 MLNRO43193 412 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 TNFRSF1AP19438 455 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 IGFBP5P24593 272 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 EPHA2P29317 976 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 OPRL1P41146 370 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 SLC15A1P46059 708 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 PRKXP51817 358 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 GRB2P62993 217 aaKnown RBP13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 MVKQ03426 396 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 ZNF92Q03936 586 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 SNAPC1Q16533 368 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 AVPI1Q5T686 147 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 SLX4IPQ5VYV7 408 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 CXXC5Q7LFL8 322 aaKnown RBP13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 PRSS45Q7RTY3 260 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 ZNF283Q8N7M2 679 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 ZNF454Q8N9F8 522 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 OTOSQ8NHW6 89 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 ITLN1Q8WWA0 313 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 RAB1CQ92928 201 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 TOR3AQ9H497 397 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 TREM2Q9NZC2 230 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 CDC42EP3Q9UKI2 254 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 KCNS2Q9ULS6 477 aa13.06□□□□□ -0.32
ECHDC2-223ENST00000542552 B4DSR2 109 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 FAM157AC9JC47 383 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 H0YL77 283 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 H3BNX3 289 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 EBAG9O00559 213 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 PRKYO43930 277 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 SELENOFO60613 162 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 SLC6A9P48067 706 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 PRSS12P56730 875 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 SLC3A1Q07837 685 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 HNRNPA0Q13151 305 aaKnown RBP13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 KPNB1Q14974 876 aaKnown RBP13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 TAF13Q15543 124 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 CHRFAM7AQ494W8 412 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 KLHL12Q53G59 568 aa13.05□□□□□ -0.32
ECHDC2-223ENST00000542552 GLYATL3Q5SZD4 288 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms