RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 HGFACQ04756 655 aa19.95■□□□□ 0.78
HOMER3-205ENST00000542541 SPOCK1Q08629 439 aa19.95■□□□□ 0.78
HOMER3-205ENST00000542541 TSPAN14Q8NG11 270 aa19.95■□□□□ 0.78
HOMER3-205ENST00000542541 ABHD4Q8TB40 342 aa19.95■□□□□ 0.78
HOMER3-205ENST00000542541 RORBQ92753 470 aa19.95■□□□□ 0.78
HOMER3-205ENST00000542541 BRD7Q9NPI1 651 aa19.95■□□□□ 0.78
HOMER3-205ENST00000542541 TRIM36Q9NQ86 728 aa19.95■□□□□ 0.78
HOMER3-205ENST00000542541 FAM206AQ9NX38 181 aa19.95■□□□□ 0.78
HOMER3-205ENST00000542541 N6AMT1Q9Y5N5 214 aa19.95■□□□□ 0.78
HOMER3-205ENST00000542541 SMPD2O60906 423 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 FAM157BP0CG42 384 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 SLC2A1P11166 492 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 RPS23P62266 143 aaKnown RBP19.94■□□□□ 0.78
HOMER3-205ENST00000542541 TBCEQ15813 527 aaPredicted RBP19.94■□□□□ 0.78
HOMER3-205ENST00000542541 CCDC58Q4VC31 144 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 ADAM5Q6NVV9 412 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 FAM57BQ71RH2 274 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 ZNF101Q8IZC7 436 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 SPARTQ8N0X7 666 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 NUP37Q8NFH4 326 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 TMEM204Q9BSN7 226 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 GTF2A1LQ9UNN4 478 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 PTPN13Q12923 2485 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 A0A087WXM4 84 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 VSTM5A8MXK1 200 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 SRSF10O75494 262 aaKnown RBP19.94■□□□□ 0.78
HOMER3-205ENST00000542541 NGFP01138 241 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 LOXP28300 417 aaPredicted RBP19.94■□□□□ 0.78
HOMER3-205ENST00000542541 MALLQ13021 153 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 SNTB2Q13425 540 aaKnown RBP19.94■□□□□ 0.78
HOMER3-205ENST00000542541 SPHARQ15513 63 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 FDX2Q6P4F2 183 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 PRSS45Q7RTY3 260 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 KLBQ86Z14 1044 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 ZNF485Q8NCK3 441 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 PGAM5Q96HS1 289 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 OR10A2Q9H208 303 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 ATP23Q9Y6H3 246 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 RTTNQ86VV8 2226 aa19.94■□□□□ 0.78
HOMER3-205ENST00000542541 PNPP00491 289 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 LCKP06239 509 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 GLRXP35754 106 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 PSMB10P40306 273 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 TGM4P49221 684 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 TAS2R43P59537 309 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 EMX1Q04741 257 aaPredicted RBP19.93■□□□□ 0.78
HOMER3-205ENST00000542541 MED22Q15528 200 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 BCL2L15Q5TBC7 163 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 OR1J1Q8NGS3 322 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 PBOV1Q9GZY1 135 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 OR51B6Q9H340 312 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 NUFIP1Q9UHK0 495 aaKnown RBP19.93■□□□□ 0.78
HOMER3-205ENST00000542541 OR52A1Q9UKL2 312 aa19.93■□□□□ 0.78
HOMER3-205ENST00000542541 SHISA9B4DS77 424 aa19.92■□□□□ 0.78
HOMER3-205ENST00000542541 TBX1O43435 398 aa19.92■□□□□ 0.78
HOMER3-205ENST00000542541 MAP2K4P45985 399 aa19.92■□□□□ 0.78
HOMER3-205ENST00000542541 PPP1CBP62140 327 aa19.92■□□□□ 0.78
HOMER3-205ENST00000542541 NKX6-1P78426 367 aaPredicted RBP19.92■□□□□ 0.78
HOMER3-205ENST00000542541 CATSPERDQ86XM0 798 aa19.92■□□□□ 0.78
HOMER3-205ENST00000542541 HS3ST6Q96QI5 342 aa19.92■□□□□ 0.78
HOMER3-205ENST00000542541 RGCCQ9H4X1 137 aa19.92■□□□□ 0.78
HOMER3-205ENST00000542541 ACOT13Q9NPJ3 140 aa19.92■□□□□ 0.78
HOMER3-205ENST00000542541 STARD10Q9Y365 291 aa19.92■□□□□ 0.78
HOMER3-205ENST00000542541 BAHCC1Q9P281 2608 aa19.92■□□□□ 0.78
HOMER3-205ENST00000542541 XRCC2O43543 280 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 ATE1O95260 518 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 CCR9P51686 369 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 BDH1Q02338 343 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 MFGE8Q08431 387 aaPredicted RBP19.91■□□□□ 0.78
HOMER3-205ENST00000542541 RPL22L1Q6P5R6 122 aaKnown RBP19.91■□□□□ 0.78
HOMER3-205ENST00000542541 ZNF704Q6ZNC4 412 aaPredicted RBP19.91■□□□□ 0.78
HOMER3-205ENST00000542541 RFPL4BQ6ZWI9 263 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 KBTBD8Q8NFY9 601 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 OR2G2Q8NGZ5 317 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 FCGR1BQ92637 280 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 G6PC2Q9NQR9 355 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 ZNF391Q9UJN7 358 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 LSM2Q9Y333 95 aaKnown RBP19.91■□□□□ 0.78
HOMER3-205ENST00000542541 FAM221AA4D161 298 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 MAGEA13PA6NCF6 341 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 ACSM1Q08AH1 577 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 ALKBH1Q13686 389 aaKnown RBP19.91■□□□□ 0.78
HOMER3-205ENST00000542541 SNAI3Q3KNW1 292 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 RGS7BPQ6MZT1 257 aaPredicted RBP19.91■□□□□ 0.78
HOMER3-205ENST00000542541 ELMOD2Q8IZ81 293 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 OR5M11Q96RB7 305 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 ZNF442Q9H7R0 627 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 VCX3AQ9NNX9 186 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 CA10Q9NS85 328 aa19.91■□□□□ 0.78
HOMER3-205ENST00000542541 CADP27708 2225 aa19.9■□□□□ 0.78
HOMER3-205ENST00000542541 HEATR1Q9H583 2144 aaKnown RBP19.9■□□□□ 0.78
HOMER3-205ENST00000542541 E9PI62 339 aa19.9■□□□□ 0.78
HOMER3-205ENST00000542541 CFL1P23528 166 aaKnown RBP19.9■□□□□ 0.78
HOMER3-205ENST00000542541 COL8A1P27658 744 aa19.9■□□□□ 0.78
HOMER3-205ENST00000542541 TIGD6Q17RP2 521 aa19.9■□□□□ 0.78
HOMER3-205ENST00000542541 ZNF718Q3SXZ3 478 aa19.9■□□□□ 0.78
HOMER3-205ENST00000542541 OR8B12Q8NGG6 310 aa19.9■□□□□ 0.78
HOMER3-205ENST00000542541 RNF166Q96A37 237 aaPredicted RBP19.9■□□□□ 0.78
HOMER3-205ENST00000542541 OPA3Q9H6K4 179 aa19.9■□□□□ 0.78
HOMER3-205ENST00000542541 FRRS1LQ9P0K9 344 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms