RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 EXOSC7Q15024 291 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 C2orf76Q3KRA6 126 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 TRAT1Q6PIZ9 186 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 RPTNQ6XPR3 784 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 PEG10Q86TG7 708 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 VASH2Q86V25 355 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 OR6V1Q8N148 313 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 FAM71CQ8NEG0 241 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 OR1S2Q8NGQ3 325 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 OR6K3Q8NGY3 331 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ADAMTS15Q8TE58 950 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 SMAP2Q8WU79 429 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 CACNG8Q8WXS5 425 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 DIO2Q92813 273 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 MR1Q95460 341 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 NKD1Q969G9 470 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 RAB3CQ96E17 227 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF75AQ96N20 296 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 TGM7Q96PF1 710 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 VPS25Q9BRG1 176 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF471Q9BX82 626 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 TMPRSS13Q9BYE2 586 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 PTGES2Q9H7Z7 377 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.18□□□□□ -1.261e-6■■■■■ 27
PDLIM5-221ENST00000542407 HIF1ANQ9NWT6 349 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 SEMA5BQ9P283 1151 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 KCNE5Q9UJ90 142 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 AK6Q9Y3D8 172 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ABCA7Q8IZY2 2146 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 LAMA1P25391 3075 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 IGHV1OR21-1A0A087WYE8 117 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 A0A0A6YYH2 397 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 A0A1B0GVT2 93 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 A6NJ64 397 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF705EA8MWA4 302 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 THY1P04216 161 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 F13BP05160 661 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 GZMHP20718 246 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 RAB5CP51148 216 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 DLX5P56178 289 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 PLAURQ03405 335 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 TLE4Q04727 773 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 GAMTQ14353 236 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 RBM39Q14498 530 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 LRRC37A5PQ49AS3 106 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 OR8G2PQ6IF36 304 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 TMEM71Q6P5X7 295 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 TSSK4Q6SA08 328 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 MYPOPQ86VE0 399 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 SIRT6Q8N6T7 355 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF283Q8N7M2 679 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF614Q8N883 585 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 OR5W2Q8NH69 310 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 EDAQ92838 391 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 PNPLA2Q96AD5 504 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 C3orf49Q96BT1 292 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 STACQ99469 402 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 SDF2Q99470 211 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ALG8Q9BVK2 526 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ELOVL1Q9BW60 279 aa7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 MKKSQ9NPJ1 570 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF443Q9Y2A4 671 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-221ENST00000542407 HMSDA8MTL9 139 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 A8MWP6 167 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 SIAH2O43255 324 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 OR2A4O95047 310 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 FARS2O95363 451 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 MRPL3P09001 348 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 STAG3L2P0CL84 134 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF44P15621 663 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ADCYAP1P18509 176 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 DCTDP32321 178 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 TDGF1P3P51864 188 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 OR1D5P58170 312 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 SMIM11AP58511 58 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 CD81P60033 236 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 PRAMEF5Q5TYX0 476 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 PRAMEF6Q5VXH4 476 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 CD300LDQ6UXZ3 194 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 WDR88Q6ZMY6 472 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF836Q6ZNA1 936 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 PRICKLE2Q7Z3G6 844 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF546Q86UE3 836 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ABHD4Q8TB40 342 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 THEM6Q8WUY1 208 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 SMIM4Q8WVI0 70 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 WFIKKN1Q96NZ8 548 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 OR2A7Q96R45 310 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 CD180Q99467 661 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ELF4Q99607 663 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 CITED1Q99966 193 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 TLNRD1Q9H1K6 362 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 PNO1Q9NRX1 252 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 RASL12Q9NYN1 266 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 LRIT1Q9P2V4 623 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 GNG8Q9UK08 70 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 CAMK2AQ9UQM7 478 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 PCDH15Q96QU1 1955 aa7.17□□□□□ -1.26
PDLIM5-221ENST00000542407 COL6A3P12111 3177 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms