RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 ZNF254O75437 659 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 LY6HO94772 140 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 LCATP04180 440 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 ACHEP22303 614 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 NR4A2P43354 598 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 RPS7P62081 194 aaKnown RBP11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 SNRPGP62308 76 aaKnown RBP11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 ROM1Q03395 351 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 POU4F2Q12837 409 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 GK2Q14410 553 aaPredicted RBP11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 TMEM255AQ5JRV8 349 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 NAA40Q86UY6 237 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 CIARTQ8N365 385 aaPredicted RBP11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 OR8G5Q8NG78 346 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 OR13G1Q8NGZ3 307 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 RFKQ969G6 155 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 SPSB4Q96A44 273 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 EME1Q96AY2 570 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 ZNF582Q96NG8 517 aaPredicted RBP11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 IL4I1Q96RQ9 567 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 REPIN1Q9BWE0 567 aaKnown RBP11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 EGLN1Q9GZT9 426 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 RIBC2Q9H4K1 309 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 CHODLQ9H9P2 273 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 DECR2Q9NUI1 292 aa11.73□□□□□ -0.53
TNFSF13B-206ENST00000542136 CHD3Q12873 2000 aaKnown RBP11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 RNF223E7ERA6 249 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 PHYHO14832 338 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 XRCC2O43543 280 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 SELENOFO60613 162 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 IGHV1-46P01743 117 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 HPXP02790 462 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 TACSTD2P09758 323 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 H2BFMP0C1H6 154 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 USF1P22415 310 aaPredicted RBP11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 TNFSF4P23510 183 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 CFL1P23528 166 aaKnown RBP11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 HTR1FP30939 366 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 DDOSTP39656 456 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 CCL8P80075 99 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 MEDAGQ5VYS4 303 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 PRSS45Q7RTY3 260 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 PACRGLQ8N7B6 248 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 THEM6Q8WUY1 208 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 SLC22A4Q9H015 551 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 TPK1Q9H3S4 243 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 POFUT1Q9H488 388 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 RGCCQ9H4X1 137 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 IL19Q9UHD0 177 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 ZNF391Q9UJN7 358 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 LAMP5Q9UJQ1 280 aa11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 NOP16Q9Y3C1 178 aaKnown RBP11.72□□□□□ -0.53
TNFSF13B-206ENST00000542136 ZSCAN5BA6NJL1 495 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 IFNL4K9M1U5 179 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 MPZL2O60487 215 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 RP2O75695 350 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 TNFRSF1AP19438 455 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 HSD11B1P28845 292 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 MAGEB1P43366 347 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 SLC6A9P48067 706 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 HLXQ14774 488 aaPredicted RBP11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 OCLNQ16625 522 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 ALKBH6Q3KRA9 238 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 PGAP1Q75T13 922 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 KLBQ86Z14 1044 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 HPS1Q92902 700 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 ELMOD3Q96FG2 381 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 CNN2Q99439 309 aaKnown RBP11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 SLC29A1Q99808 456 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 SLC30A2Q9BRI3 323 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 SAP30LQ9HAJ7 183 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 CLN6Q9NWW5 311 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 IMPAD1Q9NX62 359 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 PTTG3PQ9NZH4 202 aa11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.71□□□□□ -0.53
TNFSF13B-206ENST00000542136 ACANP16112 2415 aa11.71□□□□□ -0.54
TNFSF13B-206ENST00000542136 IGHV1-69-2A0A0G2JMI3 117 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 SLC16A6O15403 523 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 NCR1O76036 304 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 BAG2O95816 211 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 HEXAP06865 529 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 SBK2P0C263 348 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 ANPEPP15144 967 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 COL8A2P25067 703 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 NAA10P41227 235 aaPredicted RBP11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 CX3CR1P49238 355 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 PRKXP51817 358 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 SLC3A1Q07837 685 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 SNCBQ16143 134 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 Q6ZR03 302 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 MRPL21Q7Z2W9 205 aaKnown RBP11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 EGFL6Q8IUX8 553 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 ZNF679Q8IYX0 411 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 ZNF283Q8N7M2 679 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 CELF2-AS1Q8N7Q2 184 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 AMELYQ99218 206 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 MROQ9BYG7 248 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 DCLRE1BQ9H816 532 aa11.7□□□□□ -0.54
TNFSF13B-206ENST00000542136 ADGRL4Q9HBW9 690 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms