RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 TMEM184AQ6ZMB5 413 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 MBOAT1Q6ZNC8 495 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 SLC16A13Q7RTY0 426 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 RNF130Q86XS8 419 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 RBM45Q8IUH3 476 aaKnown RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 SELENOHQ8IZQ5 122 aaKnown RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 CCDC71LQ8N9Z2 235 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 RELL2Q8NC24 303 aaPredicted RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 OR4M1Q8NGD0 313 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 OR51D1Q8NGF3 324 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 OR5J2Q8NH18 312 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CXorf40AQ8TE69 158 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 SPRYD4Q8WW59 207 aaPredicted RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 ZNF707Q96C28 371 aaPredicted RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 TM4SF18Q96CE8 201 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 FAF2Q96CS3 445 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 COL21A1Q96P44 957 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 MCCC1Q96RQ3 725 aaPredicted RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 STACQ99469 402 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 RNF2Q99496 336 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 OMDQ99983 421 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 KCTD14Q9BQ13 255 aaPredicted RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 SOSTQ9BQB4 213 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 SLC30A2Q9BRI3 323 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CHCHD5Q9BSY4 110 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 TMEM208Q9BTX3 173 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ZNF426Q9BUY5 554 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ZNF436Q9C0F3 470 aaPredicted RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 DCSTAMPQ9H295 470 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ALG9Q9H6U8 611 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ZNF430Q9H8G1 570 aaPredicted RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 Q9HAA7 133 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 TPT1P8Q9HAU6 139 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CACYBPQ9HB71 228 aaKnown RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 TMEM138Q9NPI0 162 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 NLE1Q9NVX2 485 aaPredicted RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 MS4A12Q9NXJ0 267 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 TAS2R9Q9NYW1 312 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 USE1Q9NZ43 259 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CALML5Q9NZT1 146 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 GHRLQ9UBU3 117 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CLEC4EQ9ULY5 219 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 POFUT2Q9Y2G5 429 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ZNF337Q9Y3M9 751 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 PEX16Q9Y5Y5 336 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 SMAD5-AS1Q9Y6J3 95 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 IQGAP3Q86VI3 1631 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 MADDQ8WXG6 1647 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 KIF1BO60333 1816 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 MAGI3Q5TCQ9 1506 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 PALLDQ8WX93 1383 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 UNC13BO14795 1591 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 CDC42BPGQ6DT37 1551 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 DLG5Q8TDM6 1919 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 A0A1B0GUH1 482 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 LRIT2A6NDA9 550 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 HELTA6NFD8 242 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 FABP12A6NFH5 140 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 OR52A4PA6NMU1 304 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 GJE1A6NN92 205 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 H0YL77 283 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 H7C417 338 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 MRASO14807 208 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 UBDO15205 165 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 RAD51CO43502 376 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 RAMP3O60896 148 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 TOXO94900 526 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 GADD45GO95257 159 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 IGHV3-13P01766 116 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 GTF2F2P13984 249 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 GATA1P15976 413 aaPredicted RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 ZNF25P17030 456 aaPredicted RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 PVALBP20472 110 aaPredicted RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 NPR2P20594 1047 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 STOMP27105 288 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ELK4P28324 431 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 CD80P33681 288 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 CSNK1EP49674 416 aaKnown RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 ACOT2P49753 483 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 FGF8P55075 233 aaPredicted RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 TMEM33P57088 247 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 RPL23AP62750 156 aaKnown RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 CCL7P80098 99 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 DCDP81605 110 aaKnown RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 FKBP3Q00688 224 aaKnown RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 TWF1Q12792 350 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ORC2Q13416 577 aaPredicted RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 MADCAM1Q13477 382 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 FASTKQ14296 549 aaKnown RBP2.62□□□□□ -1.99
USP28-210ENST00000542033 QPRTQ15274 297 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 SLC9A3R2Q15599 337 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 OR8G1Q15617 311 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 TRAM1Q15629 374 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 UPP1Q16831 310 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ATP6V1FQ16864 119 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 ECSCRQ19T08 205 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 EXOC3L2Q2M3D2 409 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 VPS26BQ4G0F5 336 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 RNLSQ5VYX0 342 aa2.62□□□□□ -1.99
USP28-210ENST00000542033 PLCXD3Q63HM9 321 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms