RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 OR6V1Q8N148 313 aa12.82□□□□□ -0.36
CLSTN3-213ENST00000541953 SLC26A10Q8NG04 563 aa12.82□□□□□ -0.36
CLSTN3-213ENST00000541953 Q8TCH9 128 aa12.82□□□□□ -0.36
CLSTN3-213ENST00000541953 PLEKHA8Q96JA3 519 aa12.82□□□□□ -0.36
CLSTN3-213ENST00000541953 HDHD2Q9H0R4 259 aa12.82□□□□□ -0.36
CLSTN3-213ENST00000541953 RASSF4Q9H2L5 321 aa12.82□□□□□ -0.36
CLSTN3-213ENST00000541953 TMEM100Q9NV29 134 aa12.82□□□□□ -0.36
CLSTN3-213ENST00000541953 ENPP4Q9Y6X5 453 aa12.82□□□□□ -0.36
CLSTN3-213ENST00000541953 CENPVL3A0A0U1RRI6 287 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 F5H5K5 113 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 SASH3O75995 380 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 FSTL3O95633 263 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 TXNDC12O95881 172 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 IFNA8P32881 189 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 CD200P41217 278 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 SLC7A2P52569 658 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 FGD3Q5JSP0 725 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 GPR157Q5UAW9 335 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 GPR139Q6DWJ6 353 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 ASPHD2Q6ICH7 369 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 C8orf82Q6P1X6 216 aaPredicted RBP12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 BRICD5Q6PL45 260 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 NLRC3Q7RTR2 1065 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 BOLLQ8N9W6 283 aaKnown RBP12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 OR5L1Q8NGL2 311 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 TECTBQ96PL2 329 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 FUZQ9BT04 418 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 GID8Q9NWU2 228 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 B9D1Q9UPM9 204 aa12.81□□□□□ -0.36
CLSTN3-213ENST00000541953 A0A1B0GW55 424 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 LRRC30A6NM36 301 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 TNFRSF13BO14836 293 aaPredicted RBP12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 ENSAO43768 121 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 NDUFA7O95182 113 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 TSPAN15O95858 294 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 IGHV4-59P01825 116 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 DUX4L2P0CJ85 424 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 DUX4L3P0CJ86 424 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 DUX4L4P0CJ87 422 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 DUX4L5P0CJ88 424 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 DUX4L6P0CJ89 424 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 DUX4L7P0CJ90 424 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 CA6P23280 308 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 RPS27P42677 84 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 PRB3Q04118 309 aaPredicted RBP12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 POU4F2Q12837 409 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 MAPRE2Q15555 327 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 OCLNQ16625 522 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 SNAI3Q3KNW1 292 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 DUX4L9Q6RFH8 374 aaPredicted RBP12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 LYPD4Q6UWN0 246 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 C17orf107Q6ZR85 190 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 ZNF826PQ6ZT77 177 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 FKBP9P1Q75LS8 142 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 ADCK1Q86TW2 530 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 C1QL4Q86Z23 238 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 PDZD9Q8IXQ8 264 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 GJC3Q8NFK1 279 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 OR4F5Q8NH21 305 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 OR2AE1Q8NHA4 323 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 SLCO4A1Q96BD0 722 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 MAP6Q96JE9 813 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 NMNAT3Q96T66 252 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 SIRPDQ9H106 197 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 SEMA6AQ9H2E6 1030 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 MMADHCQ9H3L0 296 aaPredicted RBP12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 BEX1Q9HBH7 125 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 SRA1Q9HD15 236 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 MRPL22Q9NWU5 206 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 ADA2Q9NZK5 511 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 NDUFAF4Q9P032 175 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 DUX4Q9UBX2 424 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 TMEM5Q9Y2B1 443 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 CAPN7Q9Y6W3 813 aa12.8□□□□□ -0.36
CLSTN3-213ENST00000541953 A0A0U1RQK1 487 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 A0A1W2PRQ8 180 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 CLPSL1A2RUU4 121 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 UNC119BA6NIH7 251 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 ZNF879B4DU55 563 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 H1F0P07305 194 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 CPT2P23786 658 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 GGT2P36268 569 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 MDH1P40925 334 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 TRAP1Q12931 704 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 DGCR6Q14129 220 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 DPY19L2P2Q6ZN68 376 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 C1orf87Q8N0U7 546 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 OR4K13Q8NH42 304 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 OR52J3Q8NH60 311 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 LINC01006Q8NI28 216 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 ZNRF4Q8WWF5 429 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 C7orf34Q96L11 122 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 ERMAPQ96PL5 475 aaPredicted RBP12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 CCT8L2Q96SF2 557 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 PKP2Q99959 881 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 ANKRD19PQ9H560 264 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 NOX4Q9NPH5 578 aa12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 RPRD1BQ9NQG5 326 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-213ENST00000541953 A0A0G2JK05 382 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms